DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)h and AT1G17790

DIOPT Version :9

Sequence 1:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster
Sequence 2:NP_564037.1 Gene:AT1G17790 / 838357 AraportID:AT1G17790 Length:487 Species:Arabidopsis thaliana


Alignment Length:744 Identity:147/744 - (19%)
Similarity:217/744 - (29%) Gaps:332/744 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   397 GVKRKADTTTPTANAFESPYTQMDSKSAKIATRRESNRQVIGKK--------------------- 440
            ||.|: :.:.|..:...|..::.|....||:....|..:|...|                     
plant    30 GVSRQ-ERSVPLVSPSNSFASEDDHHMLKISLSSISKLEVRNLKRKLKSELDEVRSLIKRFDPEA 93

  Fly   441 GSGYNMSPLGVSG-----VPGLGGLVAGGVAGVAVAKNKEKLSDALKSCNEILKELFSKKHSGYA 500
            ..|.:|:..||.|     ..|.||   |..:|....|...::   .|:||.:|.:|.  ||.. |
plant    94 NPGGSMAKSGVVGRSKKVKTGNGG---GKKSGHGADKGTVQI---FKNCNSLLTKLM--KHKS-A 149

  Fly   501 WPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHD 565
            |.|..||||:.|||||||:|:|:||||||||.|:....|||..:||.||||.|.|...|||..||
plant   150 WVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKTKLGKSLYKSPLDFAEDVRLTFNNAILYNPIGHD 214

  Fly   566 VVAMGRKLQDVFEMRYANIPDEPVANAAHHHGHGHGHGHGHGHGHGHGHGHGHGHGYGGSSSLKH 630
            |......|.::||.::.:|                                          .:::
plant   215 VYRFAELLLNMFEDKWVSI------------------------------------------EMQY 237

  Fly   631 DASDSSSEDSSDTENESNSDEERSARLKMLESKLLGLQEEIRKLSEEASAKKKAKKKLKEKKKSI 695
            |                                                   ...:|.|..:   
plant   238 D---------------------------------------------------NLHRKFKPTR--- 248

  Fly   696 GGGSGSGSASHHCHATGGGANAGGAGGPGSGGHGSVSVPGGVGSLGPGGAGGANLNALLGGSLVG 760
                                              .:..|....|:.|                  
plant   249 ----------------------------------DIEFPAPAPSIAP------------------ 261

  Fly   761 HGGAAVAGGVPNVGALHSQVHDVAMAFSQMAGGGAAAGAGFGAGVTAAGASSGGKAGTLAGALAA 825
                 :...:|.:                                 ....|...........:||
plant   262 -----IVEPLPAI---------------------------------VPSPSPSSPPPPPPPPVAA 288

  Fly   826 GAAAGAGGTTAGSGSSKGAKSKGGRGAKGSGAGGVGASNNAAAGNAAGGAAGAAAGAGSVGGVGG 890
            ....                                                             
plant   289 PVLE------------------------------------------------------------- 292

  Fly   891 AGAAGGGNASKRAKGSSSAGAGGGVGGANASAGGAGARGSSKKKPSQVMNFDSEEEDTAKP---- 951
                   |.:...:.|.:...                      :|..|:....:.|:...|    
plant   293 -------NRTWEREESMTIPV----------------------EPEAVITAPEKAEEEEAPVNNR 328

  Fly   952 -MSYDEKRQLSLDINKLPGDKLGRVVHIIQNREPSLRDSNPDEIEIDFETLKPSTLRELESYVA- 1014
             ::.:|||:||.::..||.|||..||.||:...|.|...: ||||:|.::|..:||.||..:|. 
plant   329 DLTLEEKRRLSEELQDLPYDKLETVVQIIKKSNPELSQKD-DEIELDIDSLDINTLWELYRFVTG 392

  Fly  1015 --SCLRKKTHKKPSGKSKDEQMAEKKQELEKRLQDVTGQLGASKKTAKKDESASSKVEAVQPA-- 1075
              ..|.||......|..:|      .:.:...:|:.| .|.:...|::..||..: :....||  
plant   393 YKESLSKKNEAHGFGSERD------AESVHNSIQEPT-TLVSGTTTSRVTESGKA-IRTSSPARQ 449

  Fly  1076 -NPVSSSSSSSDSSSSSSSDSSSSDSSDS 1103
             |..|.||||:.|||.|.|.||.:||..|
plant   450 ENNASGSSSSNSSSSDSGSCSSDTDSDSS 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929
COG5076 387..>593 CDD:227408 75/221 (34%)
Bromo_Brdt_II_like 481..581 CDD:99930 52/99 (53%)
BET 951..1015 CDD:293640 28/71 (39%)
BRD4_CDT <2026..2046 CDD:293710
AT1G17790NP_564037.1 Bromodomain 133..230 CDD:413371 52/99 (53%)
BET 330..390 CDD:407211 26/60 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 94 1.000 Domainoid score I2516
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000322
OrthoInspector 1 1.000 - - mtm8402
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X197
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.860

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