DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)h and GTE4

DIOPT Version :9

Sequence 1:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster
Sequence 2:NP_001184922.1 Gene:GTE4 / 837133 AraportID:AT1G06230 Length:766 Species:Arabidopsis thaliana


Alignment Length:782 Identity:158/782 - (20%)
Similarity:223/782 - (28%) Gaps:371/782 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 VNAANAVQAYVNAGVSVGVDAVIP-------PQQPAKIKKGVKR----------------KADTT 405
            :.|.|..:..:|.|::.|...::.       |::..:..:.|.:                :.:..
plant   308 IGAYNDSRVLINTGINNGGGRILSGFASAGLPREVIRAPRPVNQLSISVLENTQGVNEHVEKEKR 372

  Fly   406 TPTANAF----------ESPYTQMDSKSAKIATRRESNRQVIGKKGSGYNMSPLGVSGVPGLGGL 460
            ||.||.|          :.|..:.:.||      :.|:::..|..|.|:.               
plant   373 TPKANQFYRNSEFLLGDKLPPAESNKKS------KSSSKKQGGDVGHGFG--------------- 416

  Fly   461 VAGGVAGVAVAKNKEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPM 525
                 ||..|.||          |:.:|:.|...||   .|.|..|||.:.|||.||:.||:.||
plant   417 -----AGTKVFKN----------CSALLERLMKHKH---GWVFNAPVDVKGLGLLDYYTIIEHPM 463

  Fly   526 DLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDEPVA 590
            ||||:|..:....|||..|||.||||.|.|...|||...||..|...|..:||.|:|.|      
plant   464 DLGTIKSALMKNLYKSPREFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERWAVI------ 522

  Fly   591 NAAHHHGHGHGHGHGHGHGHGHGHGHGHGHGYGGSSSLKHDASDSSSEDSSDTENESNSDEERSA 655
                                                                     .:|..|..
plant   523 ---------------------------------------------------------EADYNREM 530

  Fly   656 RLKMLESKLLGLQEEIRKLSEEASAKKKAKKKLKEKKKSIGGGSGSGSASHHCHATGGGANAGGA 720
            |.                                                    .||...|    
plant   531 RF----------------------------------------------------VTGYEMN---- 539

  Fly   721 GGPGSGGHGSVSVPGGVGSLGPGGAGGANLNALLGGSLVGHGGAAVAGGVPNVGALHSQVHDVAM 785
                      :..|.....|||                        ....|.:...:        
plant   540 ----------LPTPTMRSRLGP------------------------TMPPPPINVRN-------- 562

  Fly   786 AFSQMAGGGAAAGAGFGAGVTAAGASSGGKAGTLAGALAAGAAAGAGGTTAGSGSSKGAKSKGGR 850
                                |...|....:..|               ||.|             
plant   563 --------------------TIDRADWSNRQPT---------------TTPG------------- 579

  Fly   851 GAKGSGAGGVGASNNAAAGNAAGGAAGAAAGAGSVGGVGGAGAAGGGNASKRAKGSSSAGAGGGV 915
                                                                 :..:||...|  
plant   580 -----------------------------------------------------RTPTSATPSG-- 589

  Fly   916 GGANASAGGAGARGSSKKKPSQVMNFDSEEEDTAKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQ 980
                        |..:.|||       ...|...:.|:|:||::||..:..||.|||..:|.|:.
plant   590 ------------RTPALKKP-------KANEPNKRDMTYEEKQKLSGHLQNLPPDKLDAIVQIVN 635

  Fly   981 NREPS--LRDSNPDEIEIDFETLKPSTLRELESYVASCLRKKTHKKPSGKSKDEQMAEKKQELEK 1043
            .|..:  |||   :|||:|.:::.|.||.||:.:|.: .:|...||   |.|.|...:.:.|.|:
plant   636 KRNTAVKLRD---EEIEVDIDSVDPETLWELDRFVTN-YKKGLSKK---KRKAELAIQARAEAER 693

  Fly  1044 RLQDVTGQLGASKK-------TAKKDESASSKVEAVQPANPVSSSSSSSDSSSSSSSDSSSSDSS 1101
            ..|.......|:.:       ||||........:..:..|..|.|||||.|||||||..|.||||
plant   694 NSQQQMAPAPAAHEFSREGGNTAKKTLPTPLPSQVEKQNNETSRSSSSSSSSSSSSSSDSDSDSS 758

  Fly  1102 DS 1103
            .|
plant   759 SS 760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929
COG5076 387..>593 CDD:227408 67/238 (28%)
Bromo_Brdt_II_like 481..581 CDD:99930 45/99 (45%)
BET 951..1015 CDD:293640 27/65 (42%)
BRD4_CDT <2026..2046 CDD:293710
GTE4NP_001184922.1 PRK04335 46..>179 CDD:235285
Bromo_plant1 421..519 CDD:99938 48/110 (44%)
BET 607..669 CDD:407211 27/64 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 94 1.000 Domainoid score I2516
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000322
OrthoInspector 1 1.000 - - mtm8402
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X197
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.770

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