DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fs(1)h and NPX1

DIOPT Version :9

Sequence 1:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster
Sequence 2:NP_201137.5 Gene:NPX1 / 836452 AraportID:AT5G63320 Length:1061 Species:Arabidopsis thaliana


Alignment Length:924 Identity:184/924 - (19%)
Similarity:295/924 - (31%) Gaps:337/924 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSSEPPPRYEPPVEPV------NGIVQPPVIPPAER----PGRNTNQLQYLIKTVMKV------- 49
            |.|:.|.|  ||.|..      .|..:|||....:|    |.|......|.:.:|||.       
plant   109 SCSDGPRR--PPPENFATFVGSQGKKRPPVRSDKQRNKKGPSRLNVPTSYTVASVMKECETLLNR 171

  Fly    50 IWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYV 114
            :|.|...|||:.|||...||:|||..:||.|||:|||:.||....|.|..:...|....|:|...
plant   172 LWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSPLDFAADVRLTFSNSIA 236

  Fly   115 YNKPGEDVVVMAQTLEKVF------LQK-----------------IES--------MPKEE---- 144
            ||.||.....|||.:.|.|      ::|                 :||        |.|:|    
plant   237 YNPPGNQFHTMAQGISKYFESGWKSIEKKIPMSKPPVIPLTSSASLESEIPFEVAPMRKKEAAMN 301

  Fly   145 ---LELEP---VTAKGGKKK-------------QRAPATPKSSSGGAGASTGSGTSSAAVTSGPG 190
               |.:||   |...|.|||             |:.....:..||..|.|              |
plant   302 DNKLRVEPAKLVMTDGEKKKLGQDLMALEEDFPQKIADLLREQSGSDGQS--------------G 352

  Fly   191 SGSTKVSVAASS----------------AQQSGLQGATGA------GGGSSSTPGTQPGSGAGGA 233
            .|..::.:.|.|                .::..::.:...      ..|.|::| .||..  |..
plant   353 EGEIEIDIEALSDEILFMVRKLLDDYLREKKKSMEKSEPCEMEIVHDSGFSNSP-LQPSK--GDL 414

  Fly   234 IAARPVSAMGGTVSSTAGGAPSIPPISTMPPHTVPGSTNTTTTAMAGGVGGPGAAGANPNAAALM 298
            .....|..:||          :.|.:|:.||..:.                ..||..|..:    
plant   415 QIDEDVDIVGG----------NDPSVSSHPPLKIE----------------KDAACRNNES---- 449

  Fly   299 ASLLNAGQTGAYPGAPGQTAVNSSSLLDGSTAAVAAAAAAAAAAAAAAGGAAGAAGGAGTIPAVA 363
                              ::.:|||...||:::.:.:.:::.:...:...:...:......|.|.
plant   450 ------------------SSSSSSSSESGSSSSDSDSCSSSGSETDSIKASKPTSREEKKQPGVG 496

  Fly   364 VNA----ANAVQAYVNAGV-------------SVGVDAVI--------PPQQ------------- 390
            ::.    :|:.:..||..:             |..:|||:        ||::             
plant   497 IDKKEDDSNSEKIVVNDSLNELDQLEHTVGEKSTTMDAVVLVPDEETAPPERQISPDSPDKRYRA 561

  Fly   391 --------------------------PAKIK-------KGVKRKADTTTPTANAFESPYTQMDSK 422
                                      |.|::       |.::.:.:.....|.|.|....:..::
plant   562 AFLKNRFADTIMKAREKAFTKGEKGDPEKLRIEREEFEKRLREEKERLQAEAKAAEEARRKAKAE 626

  Fly   423 SAKIATR-----RESNRQVIGKKGSGYNMSPLGVSGVPGLGGLVAGGVAGVAVAKNKEKLSDALK 482
            :|:.|.|     ||:.||.:.|......::. |:..:..|..|.|.|..|           |.|.
plant   627 AAEKARREREQEREAARQALQKMEKTVEINE-GIRFMEDLQMLRATGTEG-----------DQLP 679

  Fly   483 SCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYH-DIIKKPMD-LGT-VKRKMDNREYKSAPE 544
            :..|::...||:               :||||..:. :....|:: ||. :|...|..|.:..|.
plant   680 TSMEVMSPKFSE---------------DMLGLGSFKMESNSNPLEHLGLYMKMDEDEDEEEDPPH 729

  Fly   545 FAADVRLI----FTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDEPVANAAHHHG-------- 597
            |:.  |.:    |....|.....|.|..         |.:..:..:|||:..||.:|        
plant   730 FSQ--RKVEDNPFDRSEKQEHSPHRVEG---------EDQLVSGNEEPVSQEAHDNGDQEDGKPI 783

  Fly   598 ----------------HGHGHGHGH-----------------GHGHGHGHGHGHGHGYGGSSSLK 629
                            .|.|.....                 |....|......|.........:
plant   784 NPNEIERQLENMPEQESGVGDKEEQETEVVDMRKQENEVVDMGVEEVHPLDRSEGRTLSPHRKER 848

  Fly   630 HDA-----SDSSSEDSSDTENESNSDEERSARLKMLESKL---------LGLQE-EIRKLSEEAS 679
            .|.     .:|.||.:.|.||:.:....:|.|.:.||:.|         .|.|| |:..:.:|.|
plant   849 EDPRASGNEESVSEKAQDYENQRDEKINQSEREEQLENVLEQESSRDDDTGEQETEVVGVGKELS 913

  Fly   680 AKKKAKKKLKEKKK 693
            ..|...:.|...::
plant   914 LDKSEGQTLSPHRE 927

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929 45/143 (31%)
COG5076 387..>593 CDD:227408 48/263 (18%)
Bromo_Brdt_II_like 481..581 CDD:99930 22/106 (21%)
BET 951..1015 CDD:293640
BRD4_CDT <2026..2046 CDD:293710
NPX1NP_201137.5 Bromo_plant1 161..259 CDD:99938 40/97 (41%)
BET 313..377 CDD:407211 14/77 (18%)
MDN1 <736..1037 CDD:227596 36/201 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 94 1.000 Domainoid score I2516
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.770

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