DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)h and AT5G55040

DIOPT Version :10

Sequence 1:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster
Sequence 2:NP_200315.2 Gene:AT5G55040 / 835595 AraportID:AT5G55040 Length:916 Species:Arabidopsis thaliana


Alignment Length:895 Identity:176/895 - (19%)
Similarity:278/895 - (31%) Gaps:272/895 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   482 KSCNEILKELFSKKHSG-YAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAPEF 545
            ||...||.:|..|...| ||    :|||.|  .|.||||:|:.|||..||::|:.|..|.:..|.
plant   189 KSLELILDKLQKKDIYGVYA----EPVDPE--ELPDYHDMIEHPMDFSTVRKKLANGSYSTLEEL 247

  Fly   546 AADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDEPVANAAHHHGHGHGHGHGHGHGH 610
            .:||.||.:|..:||..|.......|.:|::.:.::                             
plant   248 ESDVLLICSNAMQYNSSDTVYYKQARTIQEMGKRKF----------------------------- 283

  Fly   611 GHGHGHGHGHGYGGSSSLKHDASDSSSEDSSDTENESNSDEERSARLKMLESKLLGLQEEIR--- 672
                                                      ..||||:..:     ::|::   
plant   284 ------------------------------------------EKARLKIKRA-----EKELKTDE 301

  Fly   673 KLSEEASAKKKAKKKL-KEKKKSIGGGSGSGSASHHCHATGGGANAGGAGGPGSGGH-------- 728
            |:..::|.||:.::.. :...:::|....||:     :...|||:.........|||        
plant   302 KVKPDSSVKKQVRQPFSRNGLEAVGSDFSSGA-----NLASGGASQNEPVSTQIGGHEKHSYTDV 361

  Fly   729 ---GSVSVPGGVGSL--------GPG--GAGGANLNALLGGSLVGHGGAAVAGGVPNVGALHSQV 780
               |:.|:   |.||        |.|  |..|..|      |:|.....|........|.....:
plant   362 LFEGNTSL---VDSLEKAEDLSSGKGLFGKCGRKL------SVVEEDRRATYEDSDQQGDRSESI 417

  Fly   781 HDV-AMAFSQMAGGGAAAGAGFGAGVTAAGASSGGKAGTLAGALAAGAAAGAGGTTAGSGSSKGA 844
            ... .....|....|..|...:|..:....|:.|..|..:|......|..              |
plant   418 FTTFESEIKQFVAVGLHAEHAYGRSLARFAATLGPVAWKIASQRIEQALP--------------A 468

  Fly   845 KSKGGRG-----------------------AKGSGAGGVGASNNAAAGNAAGGAAGAAAGAGSVG 886
            ..|.|||                       .|.:.......||.|...|.........|      
plant   469 DFKFGRGWVGEYEPLPTPVLLFETCTPKEPPKKASVFSKRKSNAATKTNETLFKTPLPA------ 527

  Fly   887 GVGGAGAAGGGNASKRAKGSSSAGAGGGVGGANASAGGAGARGSSKKKPSQVMNFDSEEEDTAKP 951
                          |..:||.....|.......||. ||.:.||.....:||.|.        |.
plant   528 --------------KEQQGSRPVRDGNHAFPFPASI-GALSEGSPSFVATQVGNL--------KS 569

  Fly   952 MSYDEKRQLS-LDINKLPGDKLGRVVHIIQNREPSLRDSNPDEIEIDFETLKPSTLRELESYVAS 1015
            ||..|.|..| ||..| |           |||       .|.::|::.    |....:..|....
plant   570 MSQHEYRNPSQLDFVK-P-----------QNR-------IPQQVELNL----PPPAEQTNSGSGC 611

  Fly  1016 CLRKKTHKKP-------SGKSKDEQMAEKKQELEKRLQDVTGQLGASKKTAKKDESASSKVEAVQ 1073
            .|..::..|.       |.......|:....|..|......|......:..|.....::::..:.
plant   612 VLENQSFGKSDTVASYRSSSDMMRNMSSTDSEHYKHQMTTNGIFPGGLRNGKVSPGVNNRMFDLS 676

  Fly  1074 P--ANPVSSSSSSSDSSSSSSSDS---------SSSDSSDSEAVLVIPAPTGDGDER--PPRKKK 1125
            .  ||.:|.:::||.......|.|         :.::.:.::.......|..|...:  .|:..:
plant   677 TDFANQMSRTATSSQQPMRQQSQSHEEQAQIMRNFNERARTQHNSTYNHPKADAPPKISSPQSAR 741

  Fly  1126 SRDSNGSNV--NNPSINVVMGGNLP---SGALSPTTMLMGLDHVVNSNTPTSQMSNMLGNANPLT 1185
            |.||..::|  ....:::..|||..   ..|.:|.:..:..:.:.|   |:.:..:... ..|..
plant   742 SEDSGNASVAAARAWMSIGAGGNNKQTFENASNPKSSQISAESLYN---PSREHFHQQA-FKPRD 802

  Fly  1186 AAAMLNNNNKTSLPGSNFGGAPAPGNMMHAG-----AGVPVAGAAVSASTGQQHNKNGPNDLSK- 1244
            |.....:..:...|...|...|..| ||:.|     ...|:....::|.|         :|.|: 
plant   803 AEETQFHPQRNGFPFQTFVHQPVHG-MMNGGYQPFQNNRPIVFPQMAAPT---------SDFSRF 857

  Fly  1245 -VQP---GG----------PINAALPPHSFAGGTATVATSQSSGGIRIAS 1280
             ||.   ||          ..|..|||....|..:..:.::.|.|:|:.|
plant   858 HVQSQWRGGITPQVQLKQRQENFNLPPDLNIGVHSPDSPAKQSSGVRVDS 907

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929
COG5076 387..>593 CDD:227408 38/111 (34%)
Bromo_Brdt_II_like 481..581 CDD:99930 38/99 (38%)
BET 951..1015 CDD:435704 16/64 (25%)
BRD4_CDT <2026..2046 CDD:465349
AT5G55040NP_200315.2 Bromodomain 187..283 CDD:99922 38/99 (38%)
Blue background indicates that the domain is not in the aligned region.

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