DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)h and PBRM1

DIOPT Version :9

Sequence 1:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster
Sequence 2:XP_016862214.1 Gene:PBRM1 / 55193 HGNCID:30064 Length:1734 Species:Homo sapiens


Alignment Length:630 Identity:104/630 - (16%)
Similarity:179/630 - (28%) Gaps:310/630 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 KLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEK 131
            |:..|||:.|||:|:|:.||.:|::|..|.|.....:|.:.:..|...||:||..|...|.:::|
Human   244 KVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKK 308

  Fly   132 VFLQKIESMPKEELELEPVTAKGGKKKQRAPATPKSSSGGAGASTGSGTSSAAVTSGPGSGSTKV 196
            :|..|     |.|:|...: || ...:.|.|:                ..:||..:||       
Human   309 IFYMK-----KAEIEHHEM-AK-SSLRMRTPS----------------NLAAARLTGP------- 343

  Fly   197 SVAASSAQQSGLQGATGAGGGSSSTPGTQPGSGAGGAIAARPVSAMGGTVSSTAGGAPSIPPIST 261
                     |..:|:.|.....:|.......:..||.::|..::...|:.|.             
Human   344 ---------SHSKGSLGEERNPTSKYYRNKRAVQGGRLSAITMALQYGSESE------------- 386

  Fly   262 MPPHTVPGSTNTTTTAMAGGVGGPGAAGANPNAAALMASLLNAGQTGAYPGAPGQTAVNSSSLLD 326
                                           ..|||.|:....|::         .|.:.:|.:|
Human   387 -------------------------------EDAALAAARYEEGES---------EAESITSFMD 411

  Fly   327 GSTAAVAAAAAAAAAAAAAAGGAAGAAGGAGTIPAVAVNAANAVQAYVNAGVSVGVDAVIPPQQP 391
            .|                                                               
Human   412 VS--------------------------------------------------------------- 413

  Fly   392 AKIKKGVKRKADTTTPTANAFESPYTQMDSKSAKIATRRESNRQVIGKKGSGYNMSPLGVSGVPG 456
                                  :|:.|                                      
Human   414 ----------------------NPFYQ-------------------------------------- 418

  Fly   457 LGGLVAGGVAGVAVAKNKEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLH------ 515
                                |.|.::||.....:|.::       |||          |      
Human   419 --------------------LYDTVRSCRNNQGQLIAE-------PFY----------HLPSKKK 446

  Fly   516 --DYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFE 578
              ||:..||.|:.|..::.|:.|:||::......|:.|:|.|..:||.|:..:.....|||.|.:
Human   447 YPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQ 511

  Fly   579 MRYANIPDEPVANAAHHHGHGHGHGHGHGHGHGHGHGHGHGHGYGGSSSLKHDASDSSSEDSSDT 643
            .:...:                                          :.:.|..|..|..||.|
Human   512 AKKKEL------------------------------------------ARRDDIEDGDSMISSAT 534

  Fly   644 ENESNSDEERSARLKMLESKLLGLQEEIRKLSEEASAKKKAKKKL 688
            .:..::..:|:..    :|::|||    |:||.:.:.:|:..|.|
Human   535 SDTGSAKRKRNTH----DSEMLGL----RRLSSKKNIRKQRMKIL 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929 26/72 (36%)
COG5076 387..>593 CDD:227408 32/213 (15%)
Bromo_Brdt_II_like 481..581 CDD:99930 28/107 (26%)
BET 951..1015 CDD:293640
BRD4_CDT <2026..2046 CDD:293710
PBRM1XP_016862214.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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