DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)h and Brd8

DIOPT Version :9

Sequence 1:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster
Sequence 2:NP_651685.2 Gene:Brd8 / 43460 FlyBaseID:FBgn0039654 Length:872 Species:Drosophila melanogaster


Alignment Length:789 Identity:143/789 - (18%)
Similarity:246/789 - (31%) Gaps:222/789 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1009 LESYVASCLRKKTHKKPSGKSK----------------DEQMAEKK------QELEKRLQDVTGQ 1051
            |||..|:..:|::.:..:|.|.                :|:.||.|      ||..:|:|.....
  Fly    75 LESVEATKRKKRSSESSAGVSSPATVETPTELLLRRLTEERQAEIKAQMRQDQETYRRIQREIES 139

  Fly  1052 LGASKKTAKKDESASSKVEAVQPANPVSSS--SSSSDSSSSSSSDSSSSDSSDSEAVLVIPAPTG 1114
            |.:...|.::.:....::|..|.|..:...  .:..........|.:|:..:.|.||        
  Fly   140 LQSDAVTEQELQDMWLEIEKEQEARRIEEMKLENRMREREQRKKDLASNWRNSSLAV-------- 196

  Fly  1115 DGDERPPRKKKSRDSNGSNVNNPSINVVMGGNLPSGALSPTTMLMGLDHVVNSNTPTSQMSNMLG 1179
                  .|..::.|:...:::...||....|...:|   |:.:|            ||.:.:..|
  Fly   197 ------KRSNQAADTTSVDMDVEDINTSGNGKQQTG---PSPLL------------TSLLKSPTG 240

  Fly  1180 NANPLTAAAMLNNNNKTSLPGSNFGGAPAPGNMMHAGAGVPVAGAAVSASTGQQHNKNGPNDLSK 1244
            || |.|..           ||   |.|||.|     |.|   :.|..:|.|......:||:....
  Fly   241 NA-PATPT-----------PG---GAAPAAG-----GTG---SVARATAPTITSLLTSGPSSAVA 282

  Fly  1245 VQP----GGPINAAL-------PPHSFAGGTATVATSQSSGGIRI---------------ASNLH 1283
            .||    ..|.:||.       ||.|.|..|.|:..|.|.....:               :.:|.
  Fly   283 NQPVITMKSPTDAAFMSRPITGPPASEASTTPTLERSPSQAAPTLSMLLEKNMAAAKANESGSLV 347

  Fly  1284 KPSGLGGGDLGEHHAALAAALTSGINSTGTAGGGINNNGGSNNNANPLGGSHGDAMVNASLASLA 1348
            ||.|.|..:.|...|..:||        |||         .::.|:|            :.|.|.
  Fly   348 KPEGSGNQEQGVDEATSSAA--------GTA---------DSDEADP------------NEAQLL 383

  Fly  1349 SGLKQIPQFDDPVEQSLASLEFSAGSTGKSGLTDNFL--MQQHLMQPAGPQQQQQQQQQQPFGHQ 1411
            ...|.|.|..|.::..:||:           :.|..|  :...:..|:       ..:.:....:
  Fly   384 EVFKNIDQIIDDIDIDMASV-----------IDDEILKNVDDVVASPS-------NDKAEVIDFE 430

  Fly  1412 QQQQQQQQQQQQQQQHMDYVTELLSKGAENVGGMNGNHLLNFNLDMAAAYQQKHPQQQQQQAHNN 1476
            .:....:::|.:.....|     ..|..|.|.|.:.:.  |.|:.:||...|:...:.|....:.
  Fly   431 DKLDALKREQSKSSPASD-----KPKSVELVIGSSDDS--NDNIPLAAVASQESKDRGQSGGEST 488

  Fly  1477 --------------------GFNVADFGMAGFDGLNMTAASFLDLEPSLQQQQMQQMQLQQQHHQ 1521
                                |..:.....:..|    ||.|    .|:..::......|.::...
  Fly   489 RGTEDAESEPLTSEVAVEEIGETITIISTSSED----TAGS----PPTKMEEDGATDSLPKKEDA 545

  Fly  1522 QQQQQTHQQQQQHQQQHHQQQQQQQLTQQQLQQQQQQQQQQQHLQQQQHQQQHHQAANKLLIIPK 1586
            .:.:...:...|.|.:......:.:|...|..::.|.:..:.            .|...:.:..|
  Fly   546 AEDKSEQESSSQGQNKAGGSTDEPELIDHQATREAQSKSGKD------------TAGKPVTMQEK 598

  Fly  1587 PIESMMPSPPDKQQLQQHQKVLPPQQSPSDMKLHPNAAAAAAVA--------------------- 1630
            ......|.|.|.....:....|.......|   ||.:|.|...|                     
  Fly   599 TTTQSAPVPVDLHDTDEESSSLTDSSKHDD---HPRSAKAKPPALKLALDDSKSELELSGTPQPP 660

  Fly  1631 SAQAKLVQTFKANEQNLKNASSWSSLASANSPQSHTSSSSSSSKAKPAMDSFQQFRNKAKERDRL 1695
            ||.|:.....|...::...:......|:..|..|...|:.....:.|.:||.......::..|..
  Fly   661 SAPARTPLLRKLPHRDRSESPMVDDDATTASDHSTARSTRRRCSSTPVIDSIPNSPASSEHTDDR 725

  Fly  1696 KLLEAAEKE 1704
            :...||.|:
  Fly   726 RETRAASKK 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929
COG5076 387..>593 CDD:227408
Bromo_Brdt_II_like 481..581 CDD:99930
BET 951..1015 CDD:293640 3/5 (60%)
BRD4_CDT <2026..2046 CDD:293710
Brd8NP_651685.2 PaaSYMP <105..188 CDD:291408 14/82 (17%)
PHA03249 402..>582 CDD:223023 27/212 (13%)
Bromo_brd8_like 729..833 CDD:99939 3/6 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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