DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)h and tbrd-1

DIOPT Version :9

Sequence 1:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster
Sequence 2:NP_001369030.1 Gene:tbrd-1 / 42823 FlyBaseID:FBgn0039124 Length:513 Species:Drosophila melanogaster


Alignment Length:600 Identity:149/600 - (24%)
Similarity:228/600 - (38%) Gaps:205/600 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSSEPPPRYEPPVEPVNGIVQPPVIPPAERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAK 66
            :|::||||.||.::|||||||||||||..||||.||.|:.| |:|:..:|::.||:.|:.|||:.
  Fly     7 NSNQPPPRNEPYLQPVNGIVQPPVIPPPNRPGRRTNILEEL-KSVLNCLWRNRFSYHFRHPVDSV 70

  Fly    67 KLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEK 131
            .|.:||||.::|.|||:.||:|||.|.|||.|.|.::||..:|:||.:||..|..|....:.|.:
  Fly    71 SLGVPDYHAVVKHPMDLSTIRKRLHNKYYWQASEALEDFKLIFDNCLLYNLEGSPVYQAGKLLME 135

  Fly   132 VFLQKIESMP-KEELELEPVTAKGGKKKQRAPATPKSSSGGAGASTGSGTSSAAVTSGPGSGSTK 195
            .|..::||:. ..|:||:|   |..|:|::|..:...:|....|...|...|....|        
  Fly   136 AFYMRMESIDLSTEVELKP---KSEKRKRKATESLDQASTSFSAPRASNNYSRQWLS-------- 189

  Fly   196 VSVAASSAQQSGLQGATGAGGGSSST---PGTQPGSGAGGAIAARPVSAMGGTVSSTAGGAPSIP 257
                                  |||:   |...||.          ||:...:..:..|  ||:.
  Fly   190 ----------------------SSSSWLCPPPMPGG----------VSSFNPSFRNFVG--PSLI 220

  Fly   258 PISTMPPHTVPGSTNTTTTAMAGGVGGPGAAGANP-NAAALMASLLNA-----GQTGAYPGAPGQ 316
            | |.||...|                       || .:...|:|::|.     .:|......|..
  Fly   221 P-SFMPDSLV-----------------------NPMQSMHPMSSMMNPIFKNNWETNEAMDPPPS 261

  Fly   317 TAVNSSSLLDGSTAAVAAAAAAAAAAAAAAGGAAGAAGGAGTIPAVAVNAANAVQAYVNAGVSVG 381
            ..::...|  .|.||                          .:|:                    
  Fly   262 EPISYRPL--DSLAA--------------------------PLPS-------------------- 278

  Fly   382 VDAVIPPQQPAKIKKGVKRKADTTTPTANAFESPYTQMDSKSAKIATRRESNRQVIGKKGSGYNM 446
                 ||.:|..:          ..||....|||.:                             
  Fly   279 -----PPMEPMTL----------PWPTPAPVESPAS----------------------------- 299

  Fly   447 SPLGVSGVPGLGGLVAGGVAGVAVAKNKEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAEM 511
            ||......|           .:...|:.:::.:...| :.:||.:..:|.....|.|.:.     
  Fly   300 SPPPAPNPP-----------IIICYKSLDRMIEKSHS-DHLLKSMVKRKRKQVTWAFNQA----- 347

  Fly   512 LGLHDY-----------HDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHD 565
                ||           ||..:| :|...::.::|:..::|...|.:.||.:|.|..:..|.|..
  Fly   348 ----DYWRRYSQNPDYDHDREEK-LDWKILQERLDSDNFESFDGFVSSVRKMFQNALRCFPEDGL 407

  Fly   566 VVAMGRKLQDVFEMR 580
            |....:|..::||.|
  Fly   408 VKVSVKKTNEIFEKR 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929 46/105 (44%)
COG5076 387..>593 CDD:227408 37/204 (18%)
Bromo_Brdt_II_like 481..581 CDD:99930 25/110 (23%)
BET 951..1015 CDD:293640
BRD4_CDT <2026..2046 CDD:293710
tbrd-1NP_001369030.1 Bromodomain 39..143 CDD:413371 45/104 (43%)
Bromodomain 328..423 CDD:413371 24/104 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000322
OrthoInspector 1 1.000 - - mtm8402
orthoMCL 1 0.900 - - OOG6_100249
Panther 1 1.100 - - P PTHR22880
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.810

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