DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fs(1)h and dikar

DIOPT Version :9

Sequence 1:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster
Sequence 2:NP_001261480.1 Gene:dikar / 38747 FlyBaseID:FBgn0261934 Length:3261 Species:Drosophila melanogaster


Alignment Length:2665 Identity:540/2665 - (20%)
Similarity:795/2665 - (29%) Gaps:999/2665 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQ 103
            ||..:..|:..:..|..:|||..||:..  ..|.|:.||::|||:..::.:|::..|....|...
  Fly   892 LQIGMHKVLVYVKNHRDAWPFVDPVEED--IAPRYYSIIRRPMDLLKMEDKLDSGEYHKFSEFRN 954

  Fly   104 DFNTMFNNCYVYNKPGEDVVVMAQTL--------------------------------------E 130
            ||..:.|||.:||....:...|...|                                      |
  Fly   955 DFRLIVNNCRLYNGHNNEYTEMVNNLQDAFEKATKKYFDNLSDDEDDDPNLSYPAADSKMNVFRE 1019

  Fly   131 KVFLQKIE-------------SMPKEEL-ELE---PVTAKGGKKKQRAPATPKSSSGGAGASTGS 178
            |.|.:|.:             |..:|:| |:|   |..|:..|:|::.....|.:...|...|..
  Fly  1020 KYFSKKAKEETEKDAPGRPAVSSAEEDLSEIEAEAPQKAQKRKRKEKDKRRKKKTKSKADVETDD 1084

  Fly   179 ---------------GTSSAAVTSGPG--------------------------SGSTKVSVAASS 202
                           .||..:.||..|                          ...||...:||.
  Fly  1085 EDMEAEREPTPPPPPPTSKKSKTSKTGKEKEKDKEKEKDKDKEKDKETSSFKRGRKTKSDKSASK 1149

  Fly   203 AQQSGLQGATGAGGGSSSTPGTQPGSGAGGAIAARPVS-----AMGGTVSSTAGGAPSIPPISTM 262
            :.:...:||      ..|:..:.|.|....:..:...|     ::..|.|..   .|:...|:..
  Fly  1150 SSKKTKKGA------KKSSADSDPESDPSDSRESEDYSDDDHISLAKTKSLV---KPTARTIAAQ 1205

  Fly   263 PPHTVPGSTNT-TTTAMAGGVGGPGAAGANPNAAALMASLLNAGQTGAYPGAPGQTAVNSSSLLD 326
            ...:||..:.. ..|.:...|.|.|..|......:|.:.               |:.||....|.
  Fly  1206 KKKSVPAESKVKMPTPVKRQVKGKGKGGRKAKDDSLDSD---------------QSDVNVKKQLP 1255

  Fly   327 GSTAAVAAAAAAAAAAAAAAGGAAGAAGGAGTIPAVAVNAANAVQAYVNAGVSVGVDAVIPP--- 388
            .:.||..|.:||                                        .:..|...||   
  Fly  1256 PTAAAALAESAA----------------------------------------ELEEDPDDPPPDE 1280

  Fly   389 -----------QQPAKI---KKGVKRKAD-------TT---TPTANAFESPYTQMDSKSAKIATR 429
                       ..|.|:   ||..|...:       ||   .|||..     |::.::....|..
  Fly  1281 DEDEDSSRSRSMSPFKVDLHKKYSKSALNDDLSELLTTVKKVPTAET-----TKLSARHQDEADE 1340

  Fly   430 RESNRQVIG-------KKGSGYNMSPLGVSGVPGLGGLVAGGVAGVAVAKNKEKLSDALKSCNEI 487
            ..|:|:..|       .:||.....|:...|.............|....::::|..|..||  ..
  Fly  1341 ERSSRESDGDFKSLSNSRGSSEERPPVAKKGKKAESSKKEKEKKGRDKDRDRDKEKDKDKS--RS 1403

  Fly   488 LKELFSKKHSGY---AWPFYKPVDAE---MLGLHDYHDIIK-----------------KPMDLGT 529
            .|:..||..|..   |......|.||   :|...|.:|:||                 .|.:...
  Fly  1404 AKDKKSKDESPVLVAAAEAAAVVQAELDMLLPFMDKYDVIKYRRSRAAFSGSSASNSLAPSEDSK 1468

  Fly   530 VKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDEPVANAAH 594
            ......|||.:.|            :..:...||......|||.:|  :.|              
  Fly  1469 SAITKSNRENRKA------------SAKREKSPDAVENKRGRKSKD--QKR-------------- 1505

  Fly   595 HHGHGHGHGHGHGHGHGHGHGHGHGHGYGGSSSLKHDASDSSSEDSSDTENESNSDEERSARLKM 659
                                         ...|.|.:.||.:|:  :|||..|...:::....|:
  Fly  1506 -----------------------------SKESDKAEKSDKASK--ADTEKHSEKSKKKEEPPKV 1539

  Fly   660 LESKL-------LGLQEEIRK------LSEEASAK------KKAKKKLKEKK---------KSIG 696
            :|...       :...|.|::      ::..||.|      ||..||..:|:         ||..
  Fly  1540 VEKAQREKSPAPVSALETIKEPPAPTPIATSASGKVKEGPAKKEPKKRPDKQMPPPPKPADKSSE 1604

  Fly   697 GGSGSGSASHHCHATGGGANAGGAGGPGSGGHGSVSV---------------------------- 733
            .|||..|:|...        |..||.|.:..:.::..                            
  Fly  1605 KGSGKKSSSKKA--------AQKAGQPQTNNNTNLEALDVETEQTLKDINRWLEHTPRFTEFSSA 1661

  Fly   734 ---PGGVGSLGPGGAG-GANLNALLGGSLVGHGGAAVAGGVPN--VGALHSQVHDVAMAFSQMAG 792
               |.....|....:| |:.|:|......|.. .|..|..||.  ..||:..|.:...|.|:...
  Fly  1662 SNSPSRYNLLDDFDSGIGSKLDAADFRRPVAL-AAPKAELVPTKLAEALNELVSEPKEAVSKSES 1725

  Fly   793 GGAAAGAGFGAGVTAAGASSGGKAGTLAGALAAGAAAGAGGTTAGSGS----------------- 840
            ...|.        |.:..||  ..||...::.:|.:.|:...||.|.|                 
  Fly  1726 ESVAP--------TPSSVSS--SCGTPPHSMHSGNSIGSTSATAASSSNCSNNSMPTPLPVAVTP 1780

  Fly   841 -------------------------------------SKGAKSKG---GRGAKGSGAGGVGASNN 865
                                                 :|.||.|.   .:.|:.:.|..|.|..|
  Fly  1781 TPTPAPPPLLPIPKPKEPSTTQLILNPPPPPHIKQQLAKEAKRKSLKEKQAAQAAQAQQVKAKAN 1845

  Fly   866 A-------AAGNAAGGAAGAAAGAGSVGGVGGAGAAGGGNASKRAK------------GSSSAGA 911
            .       ..|.|.|..........|. ..||...||....:.:.|            |:.....
  Fly  1846 VMRTIDRLQPGKAKGNLLQNVVAVKST-EEGGDSHAGVNPVTTKVKELKNALITETCEGAPKLSL 1909

  Fly   912 GGGVGGANASAGGAGARGSSKKKPSQVMNFDSEEED------------------TAKPMSYDEKR 958
            |..:...:.|.|.:....|.||        |:.|:|                  |..|..::...
  Fly  1910 GTVLKTQDFSLGKSLEEMSGKK--------DANEDDRPNEEASPKNSSPPTTPNTEAPKPFEALH 1966

  Fly   959 QLSLDINKLPGDKLGRVVHIIQNREPSLRDSNPDEIEIDFETLKPSTLRELESYVASCLRKKTHK 1023
            :||         |.|:      :.|||..:::..|        ||:        :::.|:.....
  Fly  1967 ELS---------KRGK------SSEPSKSEASQKE--------KPN--------LSAWLKAFGGP 2000

  Fly  1024 KPSGKSKDEQMAEKKQELEKRLQDVTGQLGASKKTAKKDESAS----SKVEAVQPANPVSSSSSS 1084
            |.|.||:||   ||:|   ..:||:.|    ..|.|....|.:    |....::...|.:.|::|
  Fly  2001 KVSKKSEDE---EKQQ---TPVQDLQG----DSKVAPPAHSPAGDNFSLPTVMRQRKPSTGSTNS 2055

  Fly  1085 SDSSSSSSSDS-------------SSSDSS-------DSEAVLVIPAPTGD-------------- 1115
            ..||.|...||             :.|.:|       .:..::|.|.|..|              
  Fly  2056 ERSSFSQDPDSPRIAIDERYGSYAAGSYTSPIGASPIGASPIMVSPKPNDDMGKPASPYPLNGAI 2120

  Fly  1116 --GDERPPRKKKSRDSNGS----------------------NVNNPSINVVM---GGNL--PSG- 1150
              |..:....|.|.|.:.|                      ||:.|.::...   |||.  ||| 
  Fly  2121 KVGFYQDTTTKSSPDKSCSPREMNSPYPQYSQHIYSSASSPNVSTPDMSGTSPYGGGNSYNPSGS 2185

  Fly  1151 ------ALSPTTMLMGLDHVVNSNTPTSQMSNMLGNANPLTAAAMLNNNNKTSLPGSNFGGAPAP 1209
                  |.|.|:.|...|..   ..|.||.|:...:.:|.|.    |.::....|.|:....|..
  Fly  2186 EASKTPAYSSTSPLPIYDQY---KQPRSQESDYNSSMSPSTP----NPHSPYQQPQSSPYTTPQQ 2243

  Fly  1210 GNMMHAGAGVPVAGAAVSASTGQQHNKNGPNDLSKVQ--------PGGPINAALPPHSFAGGTAT 1266
            ....|     |......|....|||:...|....:.|        |.....|..|.||.....::
  Fly  2244 SQSTH-----PSPYHNQSPYHQQQHSPYHPPAAQQQQQSSQPSHSPAAHQQALSPMHSVESPASS 2303

  Fly  1267 VATSQSSGGIRIASNLHKPSGLGGGDLGEHHAALAAALTSGIN----------------STGT-A 1314
            .||             ..|:.|......:.|:.....:.|...                |.|. |
  Fly  2304 AAT-------------QPPTPLAQSPAEQQHSPYQQPVLSPYQQPQQQVQPPVVPPVQPSAGAQA 2355

  Fly  1315 GGGINNNGGSNNN-------------------ANPLGGS----------HGDAMVNASL--ASLA 1348
            ...:.|||.:..:                   .|||..:          :.|..:|.||  .|:.
  Fly  2356 STALGNNGYAPTHDSYQQLQQQQRSLYNPATLINPLSTAASSTASITKPNNDWSLNRSLLPPSIT 2420

  Fly  1349 SGLKQIPQFDDPVEQSLASLEFSAGSTGKSGLTDNFLMQQHLMQPA------GPQQQQQQ----- 1402
            :.:.|..|.....:|.      .||.          |.||..||.|      .|||||||     
  Fly  2421 NTVNQAAQQQQQQQQQ------QAGQ----------LQQQPQMQAAQQQLQSTPQQQQQQLQGTP 2469

  Fly  1403 QQQQPFGHQQQQQQQQQQQQ-------------QQQQH----------------------MDYVT 1432
            ||||..|.||||||||||||             .||||                      .|.|.
  Fly  2470 QQQQLQGSQQQQQQQQQQQQLQTSQQQQQQVLGHQQQHKPKYPTYAQYQSTNAAANAAAAADAVD 2534

  Fly  1433 EL------------------------------------LSKGAENVG-GMNGN--HLLNFNLDMA 1458
            .|                                    |.:..|.:| ..:||  :.:....:..
  Fly  2535 NLQQQQQKIAPPTYGSDMATFMQHQMQQPPKTDTLINPLKRPGEEIGMDYSGNAANKMQKREETP 2599

  Fly  1459 AAYQQKHPQQQ------------QQQAHNNGFNVADFGM--------AGFDGLNMTAASFL---- 1499
            |..||:..|||            |||..|:......||.        ..|:..|..||...    
  Fly  2600 AQQQQQQQQQQPTQNQTQSLLNKQQQMFNSFLGTMAFGKPIGNIAPDKAFEMYNRAAAMGFPKDF 2664

  Fly  1500 --DLEPSLQQQQMQQMQLQ-----QQHHQQQQQQTHQQQQQHQ----------QQHHQQQQQQQL 1547
              |....|||||.||...|     ||.:||.|||..||.||.|          .|::||||||..
  Fly  2665 AKDNSCQLQQQQQQQQSPQVTTNKQQANQQTQQQPQQQSQQSQPHLTQLQTALSQNYQQQQQQTQ 2729

  Fly  1548 TQQQLQQQQQQQQQQQHLQQQQHQQQH-HQAANKLLIIP-KP--------------IESMM--PS 1594
            .|:..||||||..||.:.||||.|..| :.|..:...:| ||              ..:||  ||
  Fly  2730 AQKLPQQQQQQPPQQLNYQQQQAQLNHNYTAQQQATAVPDKPPAAQSTVAAAVSESSSNMMNLPS 2794

  Fly  1595 PPDKQQLQQ-------HQKVLPPQQSPS---------------DMKLHPNA---AAAAAVASAQA 1634
            ...:..|.|       ::...||.|:.|               |..:.|.|   :|:::.|||..
  Fly  2795 TAHQHHLSQTHHLAAYNKPTPPPPQTYSNPLMQSMLGYAGNYFDKTMPPAAHMYSASSSAASAYG 2859

  Fly  1635 KLVQTFKAN------------EQNLKNASSWSSLASANSP--------------QSHTSSSSSSS 1673
            ...|....|            :|..:........|.|..|              .:..::.::::
  Fly  2860 NPAQQLPGNYVPGNNNPAHQQQQQPQQQQQQQQQAPAVPPAEVKAPAKRGRKKKAATIAAEAAAA 2924

  Fly  1674 KAKPAMDSFQQFRNKAKERDRLKLLEAAEKEKKNQKEAAEKEQQRKHHKSSSSSLTSAAVAQ--- 1735
            .||......||.:.:|:::.     :.|.:::..|::.:.::||::|.:.::......|:.|   
  Fly  2925 AAKQQQQQQQQQQQQAQQQQ-----QVAAQQQHQQQQVSAQQQQQQHQQVAAQQQQHQAMPQYNM 2984

  Fly  1736 ---AAAIAAAT------AAAAVTLGAAAAAALAS-SASNPSGGSSS---GGAGSTSQQAITGDRD 1787
               .|:.||||      .|.|:..|....|.|.| ..|:|.|.|::   ...|||:.|...    
  Fly  2985 PQSMASAAAATNNQLQAHAQALQQGFQLYAGLKSGGVSSPVGSSAATPVNSGGSTTNQTAA---- 3045

  Fly  1788 RDRDRERERERSGSGGGQSGNGNNSSNSANSNGPGSAGSGGSGGGGGSG---------------P 1837
               |......::.:||...|:..|.:.:     ||:.|..|......|.               |
  Fly  3046 ---DAAAISLKTSTGGMVPGSAFNFAPT-----PGTLGLYGDQAAAASSYLDQFRDAPNPYYMPP 3102

  Fly  1838 ASAGGPNSGGGGTANSNSGGGGGGGGPALLNAGSNSNSGVGS----GGAASSNSNSSVGGIVGSG 1898
            |.|      ..|||.:.||.....|...|       |:..||    ..|..|:..::........
  Fly  3103 APA------HSGTAANPSGNAADKGQNPL-------NTAAGSYPFLAAAHPSSRAAAAAAAYPFA 3154

  Fly  1899 GPGSN-----------------SQGSSGGGGGGPASGGGMGSGAIDYGQ--------QVAVL--- 1935
            .|.|.                 :|...||.....|:.|        |||        |.|.|   
  Fly  3155 DPNSQLYQQYLRRDDFHTRMIFNQSLLGGPAAAAAAAG--------YGQPPPPPSAYQRAALGMP 3211

  Fly  1936 TQVAANAQAQHVAAAVAAQAILAASPLGAMESGRKSVHDAQPQISRVEDIKASPGGQGQSSPAQQ 2000
            .....|.|:.....|.||...|....|....:|..|                .|.....|:.|.|
  Fly  3212 KPYDINRQSWFXQYASAANVDLQGDDLTGAATGTAS----------------GPAAASSSTAATQ 3260

  Fly  2001  2000
              Fly  3261  3260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929 32/151 (21%)
COG5076 387..>593 CDD:227408 51/262 (19%)
Bromo_Brdt_II_like 481..581 CDD:99930 26/122 (21%)
BET 951..1015 CDD:293640 11/63 (17%)
BRD4_CDT <2026..2046 CDD:293710
dikarNP_001261480.1 WHIM1 100..148 CDD:292246
Bromo_gcn5_like 892..991 CDD:99941 28/100 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.