DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)h and brd2a

DIOPT Version :10

Sequence 1:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster
Sequence 2:NP_571275.2 Gene:brd2a / 30445 ZFINID:ZDB-GENE-990415-248 Length:836 Species:Danio rerio


Alignment Length:1176 Identity:406/1176 - (34%)
Similarity:512/1176 - (43%) Gaps:466/1176 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 YEPPVEP---VNGIVQPPVIPPAERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLP 71
            :|.|..|   .:|..||.|..|: |.||.|||||:|.|.::|.:|:|||:|||.:||||.|||||
Zfish    46 FEGPALPHIAQSGPPQPAVRDPS-RQGRMTNQLQFLQKALVKTLWRHHFAWPFHEPVDAAKLNLP 109

  Fly    72 DYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK 136
            ||:.||||||||||||||||||||.||.|.:|||||||.|||:||||.:|:|:|||:|||.||||
Zfish   110 DYYNIIKQPMDMGTIKKRLENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQK 174

  Fly   137 IESMPKEELELEPVTAKGGKKKQRAPATPKSSSGGAGASTGSGTSSAAVTSGPGSGSTKVSVAAS 201
            :..||:.|.|:.....:|.:.|      ||.   |....:|..|::..|.            |.|
Zfish   175 VAQMPEVEEEIPAPVPRGKQSK------PKK---GQKLFSGGITTAHQVP------------AIS 218

  Fly   202 SAQQSGLQGATGAGGGSSSTPGTQPGSGAGGAIAARPVSAMGGTVSSTAGGAPSIPPISTMPPHT 266
            |..|...         |..||.| |.|                 |.||             ||.|
Zfish   219 SLSQLAY---------SPPTPDT-PDS-----------------VLST-------------PPQT 243

  Fly   267 VPGSTNTTTTAMAGGVGGPGAAGANPNAAALMASLLNAGQTGAYPGAPGQTAVNSSSLLDGSTAA 331
            :                                      .|..:|..|    ::|:..|.|    
Zfish   244 L--------------------------------------ITKNFPPPP----LHSTPALLG---- 262

  Fly   332 VAAAAAAAAAAAAAAGGAAGAAGGAGTIPAVAVNAANAVQAYVNAGVSVGVDAVIPPQQPAKIKK 396
                                                                  :||.||...||
Zfish   263 ------------------------------------------------------LPPTQPTAKKK 273

  Fly   397 GVKRKADTTTPTANAF-----------------------------ESPYT----QMDSKSA---- 424
            ||||||||||||....                             :||.|    .||||.:    
Zfish   274 GVKRKADTTTPTTTVMPLTLGVGGMGMGMGMGMSMGMGMGMGLGGDSPLTLSNMGMDSKQSLSLS 338

  Fly   425 -------KIATRRESNRQVIGKKGSGYNMSPLGVSGVPGLGGLVAGGVAGVAVAKNKE------K 476
                   |:..||         .|||..:.| ....:|.              ::|:.      |
Zfish   339 LGMSLEDKVPARR---------GGSGRPIKP-PRKDLPD--------------SQNQHQPVRRGK 379

  Fly   477 LSDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKS 541
            ||..|:.|:.|||||.||||:.||||||||||...||||||:|||..||||.|:|||||:|||:.
Zfish   380 LSQQLRYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYRD 444

  Fly   542 APEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDEPVANAAHHHGHGHGHGHGH 606
            |.:|||||||:|:|||||||||||||||.|:||||||.|:|.:||||:.:..             
Zfish   445 ALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRFAKMPDEPLESLP------------- 496

  Fly   607 GHGHGHGHGHGHGHGYGGSSSLKHDASDSSSED--SSDTENE----SNSDEERSARLKMLE---- 661
                    ....|.|.||.||....:|.||||.  ||::|:|    |:|:|||:.||..|:    
Zfish   497 --------PASLGGGLGGDSSSSSSSSSSSSESDVSSESESESSPSSDSEEERAHRLAQLQEQVC 553

  Fly   662 SKLLGLQEEIRKLSEEASAKKKAKKKLKEKKKSIGGGSGSGSASHHCHATGGGANAGGAGGPGSG 726
            ::|..:.|::..||.....|.|.||:.|:|||       ......|..:.               
Zfish   554 TQLRAVHEQLAALSSTPIIKPKKKKEKKDKKK-------KKKPEKHKRSR--------------- 596

  Fly   727 GHGSVSVPGGVGSLGPGGAGGANLNALLGGSLVGHGGAAVAGGVPNVGALHSQVHDVAMAFSQMA 791
                                          |::..........:|.:                  
Zfish   597 ------------------------------SVIEDEVVMRPAKIPKL------------------ 613

  Fly   792 GGGAAAGAGFGAGVTAAGASSGGKAGTLAGALAAGAAAGAGGTTAGSGSSKGAKSKGGRGAKGSG 856
                                                             .|..||:         
Zfish   614 -------------------------------------------------PKTPKSR--------- 620

  Fly   857 AGGVGASNNAAAGNAAGGAAGAAAGAGSVGGVGGAGAAGGGNASKRAKGSSSAGAGGGVGGANAS 921
                  ||:.||                              .|.::|.||:.       .:|.|
Zfish   621 ------SNSKAA------------------------------TSTQSKKSSNK-------KSNKS 642

  Fly   922 AGGAGARGSSKKKPS----------QVMNFDSEEEDTAKPMSYDEKRQLSLDINKLPGDKLGRVV 976
                  :.|.|.:|:          ...::|||||:...|||||||||||||||:|||:||||||
Zfish   643 ------KSSKKAQPTFFPPPLSHSGLTPHYDSEEEEETSPMSYDEKRQLSLDINRLPGEKLGRVV 701

  Fly   977 HIIQNREPSLRDSNPDEIEIDFETLKPSTLRELESYVASCLRKKTHKKP-------SGKSKDEQM 1034
            ||||:|||||||:||:||||||||||||||||||.||..|||||. :||       :|||::|..
Zfish   702 HIIQSREPSLRDTNPEEIEIDFETLKPSTLRELERYVMMCLRKKP-RKPFVAIKGSAGKSREELA 765

  Fly  1035 AEKKQELEKRLQDVTGQLGASKKTAKKDESASSKVEAVQPANPVSSSSSSSDSSSSSSSDSSSSD 1099
            .|||:|||:|||||:|||.:.||..|......|.||....|:.:|:||||||||||||| |||||
Zfish   766 LEKKRELERRLQDVSGQLNSVKKPQKTKAEKPSAVEPHAVASRLSASSSSSDSSSSSSS-SSSSD 829

  Fly  1100 SSDSEA 1105
            :|:|::
Zfish   830 TSESDS 835

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929 76/105 (72%)
COG5076 387..>593 CDD:227408 117/255 (46%)
Bromo_Brdt_II_like 481..581 CDD:99930 74/99 (75%)
BET 951..1015 CDD:435704 57/63 (90%)
BRD4_CDT <2026..2046 CDD:465349
brd2aNP_571275.2 Bromo_Brdt_I_like 72..178 CDD:99929 76/105 (72%)
Bromo_Brdt_II_like 383..484 CDD:99930 74/100 (74%)
BET 676..740 CDD:435704 57/63 (90%)
Blue background indicates that the domain is not in the aligned region.

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