DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)h and Brd8

DIOPT Version :10

Sequence 1:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster
Sequence 2:XP_063133293.1 Gene:Brd8 / 291691 RGDID:1307003 Length:1206 Species:Rattus norvegicus


Alignment Length:583 Identity:118/583 - (20%)
Similarity:184/583 - (31%) Gaps:217/583 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 QLQYLIKTVMKVIWK----HHFSWPFQQPV--DAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYW 96
            |.|.:.|..:.::|:    |.::..|.|||  |.    .|.||.|:::|||:.||||.:||....
  Rat   780 QAQKIWKKAIMLVWRAAANHRYANVFLQPVTDDI----APGYHSIVQRPMDLSTIKKNIENGLIR 840

  Fly    97 SAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPKEELELEPVTAKGGKKKQRA 161
            |..|..:|...||.|..:||....||..||..:::..|::|:.....:|.::             
  Rat   841 STAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDVLEQIQQFLATQLIMQ------------- 892

  Fly   162 PATPKSSSGGAGASTGSGTSSAAVTSGPGSGSTKVSVAASSAQQSGLQGATGAGGGSSSTPGTQP 226
                .|.||                                                        
  Rat   893 ----TSESG-------------------------------------------------------- 897

  Fly   227 GSGAGGAIAARPVSAMGGTVSSTAGGAPSIPPISTMPPHTVPGSTNTTTTAMAGGVGGPGAAGAN 291
                   |:|:.:.....|....|....|:|                        :|.|      
  Rat   898 -------ISAKSLRGRDSTRKQDASEKDSVP------------------------MGSP------ 925

  Fly   292 PNAAALMASL--------LNAGQTGAYPGAPGQTAVNSSSLL---------------DGSTAAVA 333
                |.:.||        |::||.  ||. ..:.:.:..||.               |...|.|.
  Rat   926 ----AFLLSLFVGCEWVWLDSGQD--YPD-DSELSNDCRSLFSSWDSSLDLDVGSWKDSEDADVE 983

  Fly   334 AAAAAAAAAAAAAGGAAGAAGGAGTIPAVAVNAANAVQAYVNAGVSVGVDAVIPPQQPAKIKKGV 398
            |.....::...                    .::..:...:.:|         .||:        
  Rat   984 ADELEESSPER--------------------ESSELLVDDMESG---------EPQE-------- 1011

  Fly   399 KRKADTTTPTANAFESPYTQMDSKSAKIATRRESNRQVIGKKGSGYNMSPLGVSGVPGLGGLVAG 463
              :.||.....:.........|||         ...|..|....|.:..||| .|..|:....|.
  Rat  1012 --EQDTQQNLLHLLSEEEALQDSK---------ETGQGEGDASDGEDTPPLG-EGRDGVRVQEAP 1064

  Fly   464 GVAGVAVAKNKEKLSDA------------LKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHD 516
            .|..:....|..:|||.            .|:..::.|.:.|.:.|.   ||.|||..:.  ...
  Rat  1065 LVNILYNCSNSSQLSDLSQGDPTQDHFLFKKTLLQVWKMIASHRFSS---PFLKPVSEKQ--APG 1124

  Fly   517 YHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQ-DVFE 578
            |.|::|:||||.|:||.:......:..||..|:.|:|.|...||..||.:..|..::| :|.|
  Rat  1125 YKDVVKRPMDLTTLKRNLSKGRIHTMAEFQRDLMLMFQNAVMYNDSDHHIYHMAVEMQREVLE 1187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929 37/107 (35%)
COG5076 387..>593 CDD:227408 54/205 (26%)
Bromo_Brdt_II_like 481..581 CDD:99930 33/99 (33%)
BET 951..1015 CDD:435704
BRD4_CDT <2026..2046 CDD:465349
Brd8XP_063133293.1 None
Blue background indicates that the domain is not in the aligned region.

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