DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)h and Brd8dc

DIOPT Version :10

Sequence 1:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster
Sequence 2:NP_808441.2 Gene:Brd8dc / 271508 MGIID:3045347 Length:273 Species:Mus musculus


Alignment Length:105 Identity:34/105 - (32%)
Similarity:55/105 - (52%) Gaps:6/105 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 QLQYLIKTVMKVIWK----HHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSA 98
            |.|:|.|..:..:||    |.||.||.:||..|:  .|.|..::|:|||:.|:|:.|......:.
Mouse   155 QDQFLFKKTLLQVWKMIASHRFSSPFLKPVSEKQ--APGYKDVVKRPMDLTTLKRNLSKGRIHTM 217

  Fly    99 KETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIE 138
            .|..:|...||.|..:||.....:..||..:::..|::|:
Mouse   218 AEFQRDLMLMFQNAVMYNDSDHHIYHMAVEMQREVLEQIQ 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929 34/105 (32%)
COG5076 387..>593 CDD:227408
Bromo_Brdt_II_like 481..581 CDD:99930
BET 951..1015 CDD:435704
BRD4_CDT <2026..2046 CDD:465349
Brd8dcNP_808441.2 Bromo_brd8_like 160..259 CDD:99939 31/100 (31%)
Blue background indicates that the domain is not in the aligned region.

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