DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)h and Brd8dc

DIOPT Version :9

Sequence 1:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster
Sequence 2:NP_808441.2 Gene:Brd8dc / 271508 MGIID:3045347 Length:273 Species:Mus musculus


Alignment Length:105 Identity:34/105 - (32%)
Similarity:55/105 - (52%) Gaps:6/105 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 QLQYLIKTVMKVIWK----HHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSA 98
            |.|:|.|..:..:||    |.||.||.:||..|:  .|.|..::|:|||:.|:|:.|......:.
Mouse   155 QDQFLFKKTLLQVWKMIASHRFSSPFLKPVSEKQ--APGYKDVVKRPMDLTTLKRNLSKGRIHTM 217

  Fly    99 KETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIE 138
            .|..:|...||.|..:||.....:..||..:::..|::|:
Mouse   218 AEFQRDLMLMFQNAVMYNDSDHHIYHMAVEMQREVLEQIQ 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929 34/105 (32%)
COG5076 387..>593 CDD:227408
Bromo_Brdt_II_like 481..581 CDD:99930
BET 951..1015 CDD:293640
BRD4_CDT <2026..2046 CDD:293710
Brd8dcNP_808441.2 Bromo_brd8_like 160..259 CDD:99939 31/100 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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