DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fs(1)h and spt7

DIOPT Version :9

Sequence 1:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster
Sequence 2:NP_596356.2 Gene:spt7 / 2540408 PomBaseID:SPBC25H2.11c Length:992 Species:Schizosaccharomyces pombe


Alignment Length:330 Identity:74/330 - (22%)
Similarity:132/330 - (40%) Gaps:79/330 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   393 KIKKGVKRKADTTTPTANAFESPYTQMD-----SKSAKIATRRESNR---QVIGKKGSGYNMSPL 449
            ::|| .:.:.||:||..::|::..:.:|     |.::|..:...|.:   |.:....|..|.:..
pombe   226 EVKK-FEDEEDTSTPNTSSFQNNSSSLDLSDNLSLNSKFGSLTSSFKYLLQYLEGNRSKINATDA 289

  Fly   450 GVSGVPGLGGLVAGGVAGVAVAKNKEKLSDALKSCNEILKELFSK------KHSGYAWPFYKPV- 507
            .|..:..            .|.|||.|.::..:...|.|.|...|      .::.::..|...| 
pombe   290 DVKQLLS------------DVKKNKSKWANDQRIGQEELYEAAEKVVLELRSYTEHSLAFLTKVS 342

  Fly   508 --DAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNP-PDHDVVAM 569
              ||.     ||:.:||:||||||:.|.:.|..|.|..||..|:.||::||:.||. |||.:...
pombe   343 KRDAP-----DYYTVIKEPMDLGTILRNLKNLHYNSKKEFVHDLMLIWSNCFLYNSHPDHPLRVH 402

  Fly   570 GRKLQDVFEMRYAN-IPDEPVANAAHHHGHGHGHGHGHGHGHGHGHGHGHGHGYGGSSSLKHDAS 633
            .:.::|. .:...| |||..:.:                                     :.|..
pombe   403 AQFMKDK-SLELINLIPDIVIQS-------------------------------------RKDYD 429

  Fly   634 DSSSEDSSDTENESNSDEERSARLKMLESKLLGLQEEIRKLSEEASAKKK----AKKKLKEKKKS 694
            ||..|...:::.||.::..:....|...|:....|:.:...::..|.::.    .||:::..|..
pombe   430 DSLIEAELESDEESTAETSKHVTSKKTSSRGGQTQQAVEVHTDANSPEENNTPVTKKEVETSKPP 494

  Fly   695 IGGGS 699
            ...||
pombe   495 AVSGS 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929
COG5076 387..>593 CDD:227408 59/218 (27%)
Bromo_Brdt_II_like 481..581 CDD:99930 35/109 (32%)
BET 951..1015 CDD:293640
BRD4_CDT <2026..2046 CDD:293710
spt7NP_596356.2 COG5076 161..554 CDD:227408 74/330 (22%)
Bromo_SPT7_like 309..420 CDD:99942 38/116 (33%)
Bromo_TP 707..783 CDD:284856
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.770

Return to query results.
Submit another query.