DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)h and bdf1

DIOPT Version :10

Sequence 1:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster
Sequence 2:NP_588301.2 Gene:bdf1 / 2538955 PomBaseID:SPCC1450.02 Length:578 Species:Schizosaccharomyces pombe


Alignment Length:1113 Identity:182/1113 - (16%)
Similarity:302/1113 - (27%) Gaps:618/1113 - (55%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSSEPPPRYEPPVEPVNGIVQPPVIPPAERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDA 65
            |...||    ||.|:.:.|...||            .|.:|.: .:::.:.:...|.||:.|||.
pombe    68 MPKKEP----EPTVKKIRGSGMPP------------PQQKYCL-AIVRQLKRTKNSAPFKVPVDP 115

  Fly    66 KKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLE 130
            .|.|:|||..|:|.|||:|||:|:|.:..|...:|.|.|.|.||:||::||.....|..|.:.|:
pombe   116 IKQNIPDYPTIVKNPMDLGTIEKKLTSYEYSVPQEFIDDMNLMFSNCFLYNGTESPVGSMGKALQ 180

  Fly   131 KVFLQKIESMPKEELELEPVTAKGGKKKQRAPATPKSSSGGAGASTGSGTSSAAVTSGPGSGSTK 195
            :||.::::.:|..|   :|..|...|.||::.:|                               
pombe   181 EVFERQLKQLPDAE---QPAAAPVKKSKQKSAST------------------------------- 211

  Fly   196 VSVAASSAQQSGLQGATGAGGGSSSTPGTQPGSGAGGAIAARPVSAMGGTVSSTAGGAPSIPPIS 260
                                                                             
pombe   212 ----------------------------------------------------------------- 211

  Fly   261 TMPPHTVPGSTNTTTTAMAGGVGGPGAAGANPNAAALMASLLNAGQTGAYPGAPGQTAVNSSSLL 325
                                                                ||.:|..|||  :
pombe   212 ----------------------------------------------------APPRTRRNSS--V 222

  Fly   326 DGSTAAVAAAAAAAAAAAAAAGGAAGAAGGAGTIPAVAVNAANAVQAYVNAGVSVGVDAVIPPQQ 390
            ..::|:|||:.|..||:                                        .||:|..:
pombe   223 SSTSASVAASTAPKAAS----------------------------------------PAVLPEGK 247

  Fly   391 PAKIKKGVKRKADTTTPTANAFESPYTQMDSKSAKIATRRESNRQVIGKKGSGYNMSPLGVSGVP 455
            |                                    .||::|.|                    
pombe   248 P------------------------------------RRRKNNSQ-------------------- 256

  Fly   456 GLGGLVAGGVAGVAVAKNKEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDI 520
                                     ::.|:.:||||:.:::..:|:|||:|||.......||.|:
pombe   257 -------------------------MRFCSTVLKELYKRQYESFAFPFYQPVDPVACDCPDYFDV 296

  Fly   521 IKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIP 585
            ||:||||.|::.|::..||.:..||.:|:.|:|.||:.||||...|..|||:|::||:.::...|
pombe   297 IKEPMDLSTIQSKLNKNEYSTLEEFESDILLMFNNCFTYNPPGTPVHVMGRQLENVFKEKWEARP 361

  Fly   586 DEPVANAAHHHGHGHGHGHGHGHGHGHGHGHGHGHGYGGSSSLK-HDASDSSSEDSSDTENESNS 649
            .                                   :..::.:| .:|...:..|:.:.|....|
pombe   362 K-----------------------------------FDDATLVKQQEAETDALFDNGEEEEALMS 391

  Fly   650 DEE-RSARLKMLESKLLGLQEEIRKLSEEASAKKKAKKKLKEKKKSIGGGSGSGSASHHCHATGG 713
            :|| ..|:...::.::..||:.:     ||...||..:..|.:::.:                  
pombe   392 EEEINGAKFAAVDKQISMLQDTL-----EAMKAKKMNRMRKPRRRDL------------------ 433

  Fly   714 GANAGGAGGPGSGGHGSVSVPGGVGSLGPGGAGGANLNALLGGSLVGHGGAAVAGGVPNVGALHS 778
                                                                             
pombe   434 ----------------------------------------------------------------- 433

  Fly   779 QVHDVAMAFSQMAGGGAAAGAGFGAGVTAAGASSGGKAGTLAGALAAGAAAGAGGTTAGSGSSKG 843
                                                                             
pombe   434 ----------------------------------------------------------------- 433

  Fly   844 AKSKGGRGAKGSGAGGVGASNNAAAGNAAGGAAGAAAGAGSVGGVGGAGAAGGGNASKRAKGSSS 908
            .|..|                                                            
pombe   434 TKEYG------------------------------------------------------------ 438

  Fly   909 AGAGGGVGGANASAGGAGARGSSKKKPSQVMNFDSEEEDTAKPMSYDEKRQLSLDINKLPGDKLG 973
                                                      |::|..:.:|:...|.|..::|.
pombe   439 ------------------------------------------PITYAMQNELAERCNYLSAEQLS 461

  Fly   974 RVVHIIQNREPSLRDSNPDEIEIDFETLKPSTLRELESYVAS------------CLRKKTHKKPS 1026
            .|..|::...|.|||:  ||||||...:||.....:..||..            .:..|..||..
pombe   462 NVAEILREEMPWLRDT--DEIEIDVGNMKPEVFHRIYRYVCKPDADSSEPASPVLMPTKPEKKKG 524

  Fly  1027 GKSKDEQMAEKKQELEKRLQDVTGQLGASKKTAKKDESASSKVEAVQPANPVSSSSSS-SDSSSS 1090
            ....:.:.|||.:.|:::|....|      ||:              |.:|.|::::: |||.|.
pombe   525 RVLSETEQAEKIRRLQQQLDRFAG------KTS--------------PTSPESNNAANVSDSESD 569

  Fly  1091 SSSDSSSS 1098
            :.|:||.|
pombe   570 NESESSES 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929 39/105 (37%)
COG5076 387..>593 CDD:227408 50/205 (24%)
Bromo_Brdt_II_like 481..581 CDD:99930 43/99 (43%)
BET 951..1015 CDD:435704 22/63 (35%)
BRD4_CDT <2026..2046 CDD:465349
bdf1NP_588301.2 Bromo_BDF1_2_I 85..187 CDD:99932 41/114 (36%)
Bromo_Brdt_II_like 256..357 CDD:99930 44/145 (30%)
BET 439..501 CDD:435704 22/63 (35%)
Blue background indicates that the domain is not in the aligned region.

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