DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)h and F13C5.2

DIOPT Version :9

Sequence 1:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster
Sequence 2:NP_508124.1 Gene:F13C5.2 / 180410 WormBaseID:WBGene00017423 Length:374 Species:Caenorhabditis elegans


Alignment Length:333 Identity:88/333 - (26%)
Similarity:123/333 - (36%) Gaps:54/333 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   431 ESNRQVIGKKGSGYNMSPLGVSGVPGLGGLVAGGVAGVAVAKNKEK-----------LSDALKSC 484
            ||.|.  |..|.|....|.|.....|    .|||.......|.|.|           |.|.||.|
 Worm    64 ESTRG--GGTGRGGRGRPRGSKNSDG----GAGGPPAKRGRKKKAKSESEDEAESDHLHDELKKC 122

  Fly   485 NEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADV 549
            ..||||.....|..:.:||.||||..:|||.|||::||||||:.|:::|:...||.:|.||..|.
 Worm   123 LSILKEFEKSTHDSFTFPFRKPVDVVLLGLTDYHEVIKKPMDMSTIRKKLIGEEYDTAVEFKEDF 187

  Fly   550 RLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRY-ANIPDEPVANAAHHHGHGHGHGHGHGHGHGHG 613
            :|:..||..||.....|.....:.:..|..:: ...|::         |...|...|...|..:.
 Worm   188 KLMINNCLTYNNEGDPVADFALQFRKKFAAKWKKEFPED---------GDSFGQEKGEKEGSDNE 243

  Fly   614 HGHGHGHGYGGSSSLKHDAS-----------DSSSEDSSDTENESNSDEERSARLKMLESKLLGL 667
            ..............:|.|.:           |...|:..:.|.|...:|:.|.....|:      
 Worm   244 DDEEEVDEKEKEEEVKEDNAEEKPAEEPEQPDEKEEEDHEDEREEQEEEDSSDEEDGLD------ 302

  Fly   668 QEEIRK---LSEEASAKKKAKKKLKEKKKSIGGGSGSGSASHHCHATG--GGANAGGAGGPGSGG 727
            .:::|:   .|..|...|..:..:.|.     ....|...|....|.|  .||:....|.....|
 Worm   303 DDDVRRHIPASTSAPVAKHPEAAMPEP-----AAEHSSIQSSEAQALGEISGAHPIHIGESEIAG 362

  Fly   728 HGSVSVPG 735
            |.:.|..|
 Worm   363 HAADSTTG 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929
COG5076 387..>593 CDD:227408 59/173 (34%)
Bromo_Brdt_II_like 481..581 CDD:99930 41/99 (41%)
BET 951..1015 CDD:293640
BRD4_CDT <2026..2046 CDD:293710
F13C5.2NP_508124.1 Bromodomain 118..219 CDD:383021 41/100 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 1 Normalized mean entropy S2825
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000322
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22880
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X197
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.860

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