Sequence 1: | NP_001259321.1 | Gene: | fs(1)h / 31722 | FlyBaseID: | FBgn0004656 | Length: | 2046 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001021008.1 | Gene: | pbrm-1 / 172504 | WormBaseID: | WBGene00007042 | Length: | 1883 | Species: | Caenorhabditis elegans |
Alignment Length: | 1954 | Identity: | 358/1954 - (18%) |
---|---|---|---|
Similarity: | 578/1954 - (29%) | Gaps: | 728/1954 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 44 KTVMKVIWKHHFSWPFQQPVDAKKLNL---------------PDYHKIIKQPMDMGTIKKRLENN 93
Fly 94 YYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESM-PKEEL-ELEPVTAKGGK 156
Fly 157 KKQRAPATPKSSSGGAGASTGSGTSSAAVTSGPGSGSTKVSVAASSAQQSGLQGATGAGGGSSST 221
Fly 222 PGTQPGSGAGGAIAARPVSAMGGTVSSTAGGAPSIPPISTMPPHTVP---GSTNTTTTAMAGGVG 283
Fly 284 GPGAAGANPNAA-----ALMASLLN-------AGQTGAYP-GA----PG-----------QTAVN 320
Fly 321 SSSL---LDGSTAAVAAAAAAAAAAAAAAGGAAGAAGGAGTIPAVAVNAANAVQAYVNAGVSVGV 382
Fly 383 DAVIPPQQPAKIKKGVKRKADTTTPTANAFESPYTQMDS-----KSAKIATRRESNRQVIGKK-- 440
Fly 441 -GSGYNMSPLGVSGVPGLGGLVAGGVAGVAVAKNKEKLSDAL--------------KSCNEILKE 490
Fly 491 LFSKKHSGYAWPFYKPVDAEMLGLHD------YHDIIKKPMDLGTVKRKMDNREYKSAPEFAADV 549
Fly 550 RLIFTNCYKYNPPDHDV-----------VAMGR-------------KLQDVFEMRYANI---PDE 587
Fly 588 PVANAAHHHGHGHGHGHGHGHGHGHGHGHGHGHGYGG-----SSSLKHDASDSSSEDSSDTENES 647
Fly 648 NSDEERSARLKMLESKLLGLQEEIRKLSEEASA-------------------------------- 680
Fly 681 --------KKKAKKKLKEKKKSIGGGSGSGSASHHCHATGGGANAGGAGGPGSGGHGSVSVPGGV 737
Fly 738 GSLGPGGAGGANLNALLGGSLVGHGGAAVAGGVPNVGALHSQVHDVAMAFSQMAGGGAAAGAG-F 801
Fly 802 GAGVTAAGAS----------SGGKAGTLAGALAAGAAAGAGGTTAGSGSSKGAKSKGGRGA---- 852
Fly 853 -KGSGAGGVGASNNAAAGNAAGGAAGAAAGAGSVGGVGGAGAAGGGNASKRAK------GSSSAG 910
Fly 911 AGGGVGGANASAGGAGARGSSKKKPSQVMNFDSEEEDTAKPMSYDEKRQLSLDINK--LPGDK-- 971
Fly 972 -------------------LGRVVHIIQNREPSLRDSNPDEIEIDFETLKPSTLRELE--SYVAS 1015
Fly 1016 CLRKKTHKKPSGKSKDEQMAEKKQEL-------EKR----LQDVTGQLGASKKTAKKDESASSKV 1069
Fly 1070 EAVQPANPVSSSSSSSDSSSSSSSDSSSSDSSDSEAVLVIPAPTGDGDERPPRKKKSRDSNGSNV 1134
Fly 1135 NNPSINVVMGGNLP---SGALSPTTMLMG--------LDHVVNSNTPTSQMSNMLGNANPLTAAA 1188
Fly 1189 MLNNNNKTSLPGSNFGGAPAPGNMMHAGAGVPVAGAAVSASTGQQHNKNGPNDLSKVQPGGPINA 1253
Fly 1254 ALP---PHSFAGGTATVATSQSSGGIRIASN-----LHKPSGLGGGDLG--------------EH 1296
Fly 1297 HAALAAALTSGINSTGTAGGGINNNGGSNNNANPLGGSHGDAMVNASLASLASGLKQIPQ----- 1356
Fly 1357 FDDPVEQSLASLEFSAGSTGKSGLTDNFLMQQHLMQPAGPQQQQ----------QQQQQQPFGHQ 1411
Fly 1412 QQQQQQQQQQQQQQQHMD------YVTEL---LSKGAENVGGMNGNHLLNFNLDMAAAYQQK--- 1464
Fly 1465 ------HPQQ--QQQQAHNNGFNVADFGMAGFDGLNMTAASFLDLEPSLQQQQMQQMQLQQQHHQ 1521
Fly 1522 QQQQQTHQQQQQHQQQHHQQQQQQQL--TQQQLQQQQQQQQQQQHL--QQQQHQQQHHQAANKLL 1582
Fly 1583 IIPKPIESMMPSPPDKQQLQQHQKVL------------------PPQQSPSDMKLHPNAAAAAAV 1629
Fly 1630 ASAQAKLVQTFKANEQNLKNASSWSSLASANSPQSHTSSSSSSSKAKPAMDSFQQFRNKAKERDR 1694
Fly 1695 LKLL 1698 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
fs(1)h | NP_001259321.1 | Bromo_Brdt_I_like | 34..140 | CDD:99929 | 28/110 (25%) |
COG5076 | 387..>593 | CDD:227408 | 52/260 (20%) | ||
Bromo_Brdt_II_like | 481..581 | CDD:99930 | 29/143 (20%) | ||
BET | 951..1015 | CDD:293640 | 14/88 (16%) | ||
BRD4_CDT | <2026..2046 | CDD:293710 | |||
pbrm-1 | NP_001021008.1 | Bromo_polybromo_I | 40..153 | CDD:99954 | |
Bromodomain | 198..293 | CDD:383021 | |||
Bromo_polybromo_III | 343..443 | CDD:99951 | 27/102 (26%) | ||
Bromo_polybromo_V | 535..638 | CDD:99946 | 22/132 (17%) | ||
Bromo_polybromo_V | 710..815 | CDD:99946 | 26/115 (23%) | ||
Bromo_polybromo_VI | 822..936 | CDD:99956 | 23/143 (16%) | ||
BAH_polybromo | 993..1114 | CDD:240068 | 21/162 (13%) | ||
BAH_polybromo | 1201..1313 | CDD:240068 | 25/127 (20%) | ||
HMG-box | 1451..1503 | CDD:238037 | 7/51 (14%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |