DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fs(1)h and bet-1

DIOPT Version :9

Sequence 1:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster
Sequence 2:NP_001366626.1 Gene:bet-1 / 172054 WormBaseID:WBGene00022473 Length:857 Species:Caenorhabditis elegans


Alignment Length:1312 Identity:296/1312 - (22%)
Similarity:434/1312 - (33%) Gaps:559/1312 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SEPPPRYEPPVEPVNGIVQPPVIPPAERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKL 68
            |:..|...|..:|:.|||||.|:||..:|.|:||:|.|::.||:|...||...||||:||||..|
 Worm     9 SQQRPWASPRQQPIKGIVQPRVLPPFGKPTRHTNKLDYIMTTVLKEAGKHKHVWPFQKPVDAVAL 73

  Fly    69 NLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVF 133
            .:|.||:.:.:|||:.||:.||::.||..|:|.|.|..|:|.|||.:|...:||.:|||.:.:|.
 Worm    74 CIPLYHERVARPMDLKTIENRLKSTYYTCAQECIDDIETVFQNCYTFNGKEDDVTIMAQNVHEVI 138

  Fly   134 LQKIESMPKEELELEPVTAKGGKKKQRAPATPKSSSGGAGASTGSGTSSAAVTSGPGSGSTKVSV 198
            .:.:|..|:||.:::....|..||       |..|.||:                          
 Worm   139 KKSLEQAPREEHDMDVYWGKNKKK-------PAKSDGGS-------------------------- 170

  Fly   199 AASSAQQSGLQGATGAGGGSSSTPGTQPGSGAGGAIAARPVSAMGGTVSSTAGGAPSIPPISTMP 263
            .:||::::..:|           |...|             |..|..|||.              
 Worm   171 KSSSSKKNDARG-----------PSEAP-------------SEAGSEVSSV-------------- 197

  Fly   264 PHTVPGSTNTTTTAMAGGVGGPGAAGANPNAAALMASLLNAGQTGAYPGAPGQTAVNSSSLLDGS 328
                                                                             
 Worm   198 ----------------------------------------------------------------- 197

  Fly   329 TAAVAAAAAAAAAAAAAAGGAAGAAGGAGTIPAVAVNAANAVQAYVNAGVSVGVDAVIPPQQPAK 393
            |.|.|||...:.:|:.||                                        .|::...
 Worm   198 TTASAAAPTVSESASVAA----------------------------------------KPERKVA 222

  Fly   394 IKKGVKRKADTTTPTANAFESPYTQMDSKSAKIATRRESNRQVIGKKGSGYNMSPLGVSGVPGLG 458
            .||..||||:             ::.|.|...:..:||                           
 Worm   223 GKKTGKRKAE-------------SEDDEKPEPLRAKRE--------------------------- 247

  Fly   459 GLVAGGVAGVAVAKNK--EKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDII 521
                     |||.|.:  :.|..::|.|.::|.:..:||:..:||||.:|||||.|||||||.||
 Worm   248 ---------VAVVKKEVHQPLLPSMKPCLKLLNDFSTKKYQEFAWPFNEPVDAEQLGLHDYHKII 303

  Fly   522 KKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPD 586
            |:||||.::|.||::..||...:|..||||:..||:.|||....|.:.|.:.|:||:.|:|.:.|
 Worm   304 KEPMDLKSMKAKMESGAYKEPSDFEHDVRLMLRNCFLYNPVGDPVHSFGLRFQEVFDRRWAELGD 368

  Fly   587 E------------PVANAAHHHGHGHGHGHGHGHGHGHGHGHGHGHGYGGSSSLKHDASDSSSED 639
            .            |:|....                            ...||...:..:|..|.
 Worm   369 SSSRASSVAPQSAPIAPTPK----------------------------VAKSSAPKEPKESRKEH 405

  Fly   640 SSDTENESNSDEERSARLKMLESKLLGLQEEIRKLSEEASAKKKAKKKL---KEKKKSIGGGSGS 701
            ..:|..|::.  .:|..|..:.:.|..::|...||..|.:|.:..|.||   |.:::.       
 Worm   406 KKETTFEASG--AKSEDLMQINNALSMIREREEKLKAELAAAQAIKDKLTSVKNRRED------- 461

  Fly   702 GSASHHCHATGGGANAGGAGGPGSGGHGSVSVPGGVGSLGPGGAGGANLNALLGGSLVGHGGAAV 766
                                                           |.|......|:....|..
 Worm   462 -----------------------------------------------NPNEPFPEKLINETRALC 479

  Fly   767 AGGVPNVGALHSQVHDVAMAFSQMAGGGAAAGAGFGAGVTAAGASSGGKAGTLAGALAAGAAAGA 831
            .          :||                                                   
 Worm   480 T----------TQV--------------------------------------------------- 483

  Fly   832 GGTTAGSGSSKGAKSKGGRGAKGSGAGGVGASNNAAAGNAAGGAAGAAAGAGSVGGVGGAGAAGG 896
             |..|.|.|:..|..:.||..|.                                          
 Worm   484 -GQNASSSSASSAALRNGRSKKA------------------------------------------ 505

  Fly   897 GNASKRAKGSSSAGAGGGVGGANASAGGAGARGSSKKKPSQVMNFDSEEEDTAKPMSYDEKRQLS 961
              ||.|..|                                 ..|||::||....::|:|||.||
 Worm   506 --ASARLYG---------------------------------YEFDSDDEDNKMALTYEEKRNLS 535

  Fly   962 LDINKLPGDKLGRVVHIIQNREPS------LRDSNPDEIEIDFETLKPSTLRELESYVASCLRKK 1020
            ..||.||.::|..::.|||.||.|      |.||   |:|:|||:|....|||:.:::      |
 Worm   536 NLINNLPNNQLNTIISIIQRRERSALMQQQLDDS---EVELDFESLGDMCLREMGAFI------K 591

  Fly  1021 THKKPSGKSKDEQMAEKKQELEKRLQDVTGQLGASKKTAKKDESASSKVEAVQPANPVSSSSSSS 1085
            |....:|...||   :.|..........||..|:|...:|..:..|.|        ..:.|.||.
 Worm   592 TIPTLNGNGDDE---KPKTSSNPTSSGATGSKGSSSLESKNGKKTSEK--------NFNMSESSD 645

  Fly  1086 DSSSSS-------SSDSSSSDSSDSEAVLVIPAPTGDGDERP----PRK-----KKSRDSNGSNV 1134
            |.:|:|       ||:|.||.|||.::         |.::||    |||     ..||:.|.|:.
 Worm   646 DETSNSRKRRKRESSESQSSSSSDDDS---------DDEDRPISGIPRKSGQPPSTSREWNQSSA 701

  Fly  1135 NNPSINVVMGGNLPSGALSPTTMLMGLDHVVNSNTPTSQMSNMLGNANPLTAAAMLNNNNKTSLP 1199
            ..|.:. .|||..|.                 |..|.|..          |:.:.:..||..:  
 Worm   702 PPPRMG-GMGGQPPM-----------------SRVPASSS----------TSVSAIGKNNAAA-- 736

  Fly  1200 GSNFGGAPAPGNMMHAGAGVPVAGAAVSASTGQQHNK----NGPNDLSKVQPGGPINAALPPHSF 1260
            .||...||.|       |.||...::...:..:..:|    .|.:.|..:.|  ....|.||..|
 Worm   737 SSNSYQAPKP-------APVPAPTSSRPPAAPRPPSKPKKTGGASILDTLLP--DTFGASPPQFF 792

  Fly  1261 AGGTATVATSQS 1272
            .....|.||.:|
 Worm   793 QSQPTTSATIRS 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929 48/105 (46%)
COG5076 387..>593 CDD:227408 69/219 (32%)
Bromo_Brdt_II_like 481..581 CDD:99930 48/99 (48%)
BET 951..1015 CDD:293640 29/69 (42%)
BRD4_CDT <2026..2046 CDD:293710
bet-1NP_001366626.1 Bromo_Brdt_I_like 39..145 CDD:99929 48/105 (46%)
PLN02967 95..>240 CDD:215521 57/333 (17%)
Bromo_Brdt_II_like 262..363 CDD:99930 48/100 (48%)
Ribosomal_P1_P2_L12p <371..416 CDD:419700 8/74 (11%)
BET 526..592 CDD:407211 29/74 (39%)
DMRT-like <684..730 CDD:374115 15/73 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 102 1.000 Domainoid score I4291
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 366 1.000 Inparanoid score I1250
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000322
OrthoInspector 1 1.000 - - otm14347
orthoMCL 1 0.900 - - OOG6_100249
Panther 1 1.100 - - LDO PTHR22880
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3378
SonicParanoid 1 1.000 - - X197
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.080

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