DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fs(1)h and Brd2

DIOPT Version :10

Sequence 1:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster
Sequence 2:NP_034368.2 Gene:Brd2 / 14312 MGIID:99495 Length:798 Species:Mus musculus


Alignment Length:1159 Identity:427/1159 - (36%)
Similarity:520/1159 - (44%) Gaps:465/1159 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SSEPPPRYEPPVEPVNGIVQPPVIPPAERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKK 67
            :|.|..:..|...|      ||.:...::|||.|||||||.|.|||.:|||.|:|||:|||||.|
Mouse    48 ASVPALQLAPANPP------PPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVK 106

  Fly    68 LNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKV 132
            |.||||||||||||||||||:||||||||:|.|.:|||||||.|||:||||.:|:|:|||||||:
Mouse   107 LGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKI 171

  Fly   133 FLQKIESMPKEELELEPVTAKGGKKKQRAPATPKSSSGGAGASTGSGTSSAAVTSGPGSGSTKVS 197
            ||||:.|||:||.||.....|...||              ||.                      
Mouse   172 FLQKVASMPQEEQELVVTIPKNSHKK--------------GAK---------------------- 200

  Fly   198 VAASSAQQSGLQGATGAGGGSSSTPGTQPGSGAGGAIAARPVSAMGGTVSSTAGGAPSIPPISTM 262
                                                     ::|:.|:::|    |..:|.:|::
Mouse   201 -----------------------------------------LAALQGSITS----AHQVPAVSSV 220

  Fly   263 -------PPHTVPGSTNTTTTAMAGGVGGPGAAGANPNAAALMASLLNAGQTGAYPGAPGQTAVN 320
                   ||..:|      ||.:  .:..|...     ::.|:.||.:||.              
Mouse   221 SHTALYTPPPEIP------TTVL--NIPHPSVI-----SSPLLKSLHSAGP-------------- 258

  Fly   321 SSSLLDGSTAAVAAAAAAAAAAAAAAGGAAGAAGGAGTIPAVAVNAANAVQAYVNAGVSVGVDAV 385
                                                   |.:||:||                  
Mouse   259 ---------------------------------------PLLAVSAA------------------ 266

  Fly   386 IPPQQPAKIKKGVKRKADTTTPTANAF------ESPYTQMDSKSAKI-ATRRESNRQV------- 436
             ||.||...||||||||||||||..|.      .||...::.|:|:: ..||||.|.:       
Mouse   267 -PPAQPLAKKKGVKRKADTTTPTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDL 330

  Fly   437 --------IGKKGSGYNMSPLGVSGVPGLGGLVAGGVAGVAVAKNKEKLSDALKSCNEILKELFS 493
                    ..|||                                  |||:.||.||.|||||.|
Mouse   331 PDSQQQHQSSKKG----------------------------------KLSEQLKHCNGILKELLS 361

  Fly   494 KKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYK 558
            |||:.|||||||||||..|||||||||||.||||.||||||:||:|:.|.||||||||:|:||||
Mouse   362 KKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYK 426

  Fly   559 YNPPDHDVVAMGRKLQDVFEMRYANIPDE-------PVANAAHHHGHGHGHGHGHGHGHGHGHGH 616
            |||||||||||.||||||||.|||.:|||       ||:.|.                       
Mouse   427 YNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPGPLPVSTAL----------------------- 468

  Fly   617 GHGHGYGGSSSLKHDASDSSSEDSSDTENE------------SNSDEERSARLKMLESKLLGLQE 669
              ..|...||| :..:.:||||.||:.|.|            |:|:|||:.||..|:.:|..:.|
Mouse   469 --PPGLTKSSS-ESSSEESSSESSSEEEEEEEEDEDEEESESSDSEEERAHRLAELQEQLRAVHE 530

  Fly   670 EIRKLSEEASAKKKAKKKLKEKKKSIGGGSGSGSASHHCHATGGGANAGGAGGPGSGGHGSVSVP 734
            ::..||:...:|.|.|::.|||||       ...|..|....|...:..|...|           
Mouse   531 QLAALSQGPISKPKRKREKKEKKK-------KRKAEKHRGRIGIDEDDKGPRAP----------- 577

  Fly   735 GGVGSLGPGGAGGANLNALLGGSLVGHGGAAVAGGVPNVGALHSQVHDVAMAFSQMAGGGAAAGA 799
                                                          .......|:.||||     
Mouse   578 ----------------------------------------------RPPQPKKSKKAGGG----- 591

  Fly   800 GFGAGVTAAGASSGGKAGTLAGALAAGAAAGAGGTTAGSGSSKGAKSKGGRGAKGSGAGGVGASN 864
                         |..|.||:..                                    |.|.| 
Mouse   592 -------------GSNATTLSHP------------------------------------GFGTS- 606

  Fly   865 NAAAGNAAGGAAGAAAGAGSVGGVGGAGAAGGGNASKRAKGSSSAGAGGGVGGANASAGGAGARG 929
                                           ||:::|..|.|....                   
Mouse   607 -------------------------------GGSSNKLPKKSQKTA------------------- 621

  Fly   930 SSKKKPSQVMNFDSEEEDTAKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREPSLRDSNPDEI 994
                .|.....:|||||:.::|||||||||||||||||||:||||||||||.||||||||||:||
Mouse   622 ----PPVLPTGYDSEEEEESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEI 682

  Fly   995 EIDFETLKPSTLRELESYVASCLRKK-----THKKPSGKSKDEQMAEKKQELEKRLQDVTGQLGA 1054
            ||||||||||||||||.||.||||||     |.:||.||:|:|...|||:|||||||||:|||.:
Mouse   683 EIDFETLKPSTLRELERYVLSCLRKKPRKPYTIRKPVGKTKEELALEKKRELEKRLQDVSGQLNS 747

  Fly  1055 SKKTAKKDESASSKVE--AVQPA-NPVSSSSSSSDSSSSSSSDSSSSDSSDSEA 1105
            :||..||   ||.|.|  |.|.| :.:|:||||||||||||| |||||:|||::
Mouse   748 TKKPPKK---ASEKTESSAQQVAVSRLSASSSSSDSSSSSSS-SSSSDTSDSDS 797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929 81/105 (77%)
COG5076 387..>593 CDD:227408 123/234 (53%)
Bromo_Brdt_II_like 481..581 CDD:99930 81/99 (82%)
BET 951..1015 CDD:435704 59/63 (94%)
BRD4_CDT <2026..2046 CDD:465349
Brd2NP_034368.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 53..72 4/24 (17%)
Bromo_Brdt_I_like 73..179 CDD:99929 81/105 (77%)
PHA03247 <215..332 CDD:223021 46/201 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 267..348 34/114 (30%)
Bromo_Brdt_II_like 348..449 CDD:99930 81/100 (81%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 454..645 70/389 (18%)
Nuclear localization signal. /evidence=ECO:0000255 553..557 2/10 (20%)
BET 639..701 CDD:435704 57/61 (93%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 736..798 42/66 (64%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.