DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fs(1)h and Brdt

DIOPT Version :9

Sequence 1:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster
Sequence 2:XP_006534791.1 Gene:Brdt / 114642 MGIID:1891374 Length:961 Species:Mus musculus


Alignment Length:1292 Identity:386/1292 - (29%)
Similarity:506/1292 - (39%) Gaps:534/1292 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 IVQPPVIPP----AERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQP 80
            ||.||  ||    .::.||.|||||:|.:.|:|.:|||.|||||||||||.||.||||:.|||.|
Mouse    10 IVNPP--PPEYINTKKSGRLTNQLQFLQRVVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTP 72

  Fly    81 MDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPKEEL 145
            ||:.||||||||.||..|.|.|:||||||:|||:|||.|:|:|||||.|||:|:||:..||:|| 
Mouse    73 MDLNTIKKRLENKYYEKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLFMQKLSQMPQEE- 136

  Fly   146 ELEPVTAKGGKKKQRAPATPKSSSGGAGASTGSGTSSAAVTSGPGSGSTKVSVAASSAQQSGLQG 210
                 ...|||::.:.....|                               :|.|||::.    
Mouse   137 -----QVVGGKERIKKDIQQK-------------------------------IAVSSAKEQ---- 161

  Fly   211 ATGAGGGSSSTPGTQPGSGAGGAIAARPVSAMGGTVSSTAGGAPS-IPPISTMPPHTVPGSTNTT 274
                          .|...|......:.:              || :|.||..|           
Mouse   162 --------------IPSKAAENVFKRQEI--------------PSGLPDISLSP----------- 187

  Fly   275 TTAMAGGVGGPGAAGANPNAAALMASLLNAGQTGAYPGAPGQTAVNSSSLLDGSTAAVAAAAAAA 339
                                       ||..|.     ||  ...:|.||:              
Mouse   188 ---------------------------LNMAQE-----AP--PICDSQSLV-------------- 204

  Fly   340 AAAAAAAGGAAGAAGGAGTIPAVAVNAANAVQAYVNAGVSVGVDAVIPPQQPAKIKKGVKRKADT 404
                                                                 :|.|||||:|||
Mouse   205 -----------------------------------------------------QITKGVKRRADT 216

  Fly   405 TTPTAN----AFESPYTQMDSKSAKIATRRESNRQVIGKKGSGYNMSPLGVSGVPGLGGLVAGGV 465
            ||||.:    :.|||.|..::|...:..:..:.:.|:......:.                    
Mouse   217 TTPTTSIAKASSESPPTLRETKPVNMPVKENTVKNVLPDSQQQHK-------------------- 261

  Fly   466 AGVAVAKNKEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTV 530
                |.|. .|:::.||.|:|||||:.:|||..||||||.||||:.||||:|:|::|.||||||:
Mouse   262 ----VLKT-VKVTEQLKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTI 321

  Fly   531 KRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDEPV--ANAA 593
            |.||||:|||.|.||||||||:|.||||||||||:||||.|.||||||:.:|.|||||:  .:|.
Mouse   322 KGKMDNQEYKDAYEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFELHFAKIPDEPIESMHAC 386

  Fly   594 HHHGHGHGHGHGHGHGHGHGHGHGHGHGYGGSSSLKHDASDSSSEDSSDTENESNSDEERSARLK 658
            |.                            .::|.:..:.:||||.||...:..:|::||...|.
Mouse   387 HL----------------------------TTNSAQALSRESSSEASSGDASSEDSEDERVQHLA 423

  Fly   659 MLESKLLGLQEEIRKLSE---EASAKKKAKKKLKEKKKSIGGGSGSGSASHHCHATGGGANAGGA 720
            .|:.:|..:.::::.||:   ....||..|.|...|:|.:                         
Mouse   424 KLQEQLNAVHQQLQVLSQVPLRKLKKKNEKSKRAPKRKKV------------------------- 463

  Fly   721 GGPGSGGHGSVSVPGGVGSLGPGGAGGANLNALLGGSLVGHGGAAVAGGVPNVGALHSQVHDVAM 785
                                                                             
Mouse   464 ----------------------------------------------------------------- 463

  Fly   786 AFSQMAGGGAAAGAGFGAGVTAAGASSGGKAGTLAGALAAGAAAGAGGTTAGSGSSKGAKSKGGR 850
                                                                             
Mouse   464 ----------------------------------------------------------------- 463

  Fly   851 GAKGSGAGGVGASNNAAAGNAAGGAAGAAAGAGSVGGVGGAGAAGGGNASKRAKGSSSAGAGGGV 915
                         ||.                             ..|..|:.|.......    
Mouse   464 -------------NNR-----------------------------DENPRKKPKQMKQKEK---- 482

  Fly   916 GGANASAGGAGARGSSKKKPSQVMNFDSEEEDTAKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQ 980
                     |......||||.    ..|||||.||||:|||||||||||||||||||||:|||||
Mouse   483 ---------AKINQPKKKKPL----LKSEEEDNAKPMNYDEKRQLSLDINKLPGDKLGRIVHIIQ 534

  Fly   981 NREPSLRDSNPDEIEIDFETLKPSTLRELESYVASCLRKKTHKKPSGK----SKDEQMAEKKQEL 1041
            :||||||:||||||||||||||.|||||||.||.:||||:: .||..|    ||:|..:|||.||
Mouse   535 SREPSLRNSNPDEIEIDFETLKASTLRELEKYVLACLRKRS-LKPQAKKVVRSKEELHSEKKLEL 598

  Fly  1042 EKRLQDVTGQLGASKKTAKKDESASSKVEAVQPANPV---------------------------- 1078
            |:||.||..||...|:..|:    .:|||...|..|.                            
Mouse   599 ERRLLDVNNQLNCRKRQTKR----PAKVEKPPPPPPPPPPPPPPPELASGSRLTDSSSSSGSGSG 659

  Fly  1079 -------SSSSSSSDSSSSSSSDSSSSDSSDSEAVLVIPAPTG-DGDERPPRKK-KSRDSNGSNV 1134
                   |||||||..|:|||||||||||||||.. :.|..|| ..::.||::. |...|:..::
Mouse   660 SSSSSSGSSSSSSSSGSASSSSDSSSSDSSDSEPE-IFPKFTGVKQNDLPPKENIKQIQSSVQDI 723

  Fly  1135 NNPSINVVMGGNLPSGA----------LSPTTMLMGLDHVVNSNTPTSQMSNMLGNANPLTAAAM 1189
            .:....:......|.||          ...|..|...::..:..|.......:||:...:.....
Mouse   724 TSAEAPLAQQSTAPCGAPGKHSQQMLGCQVTQHLQATENTASVQTQPLSEYVLLGDCKRVLLGPP 788

  Fly  1190 LNNNNKTSL----PGSNFGGAPAPGNMMHAGA------GVPVAGAAVSASTGQQHNK 1236
            :.:.:..||    |..:   |||..::....|      |.||..::|..|:.:..|:
Mouse   789 VVHTSAESLTVLEPECH---APAQKDIKIKNADSWKSLGKPVKASSVLKSSDELFNQ 842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929 73/105 (70%)
COG5076 387..>593 CDD:227408 101/211 (48%)
Bromo_Brdt_II_like 481..581 CDD:99930 73/99 (74%)
BET 951..1015 CDD:293640 57/63 (90%)
BRD4_CDT <2026..2046 CDD:293710
BrdtXP_006534791.1 Bromo_Brdt_I_like 26..132 CDD:99929 73/105 (70%)
Bromo_Brdt_II_like 271..372 CDD:99930 73/100 (73%)
BET 505..567 CDD:374956 55/61 (90%)
BRD4_CDT 919..961 CDD:374989
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000322
OrthoInspector 1 1.000 - - otm43131
orthoMCL 1 0.900 - - OOG6_100249
Panther 1 1.100 - - O PTHR22880
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3378
SonicParanoid 1 1.000 - - X197
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.800

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