DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)h and brdt

DIOPT Version :9

Sequence 1:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster
Sequence 2:XP_012817895.2 Gene:brdt / 100144959 XenbaseID:XB-GENE-983868 Length:1013 Species:Xenopus tropicalis


Alignment Length:1325 Identity:387/1325 - (29%)
Similarity:525/1325 - (39%) Gaps:512/1325 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 NGIVQPPVIPP----AERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIK 78
            :.||.||  ||    .::.||.|||||||.|.|:|.:|:|||||||||||||.|||||||::|||
 Frog    10 SSIVNPP--PPEYINRKKTGRLTNQLQYLEKVVLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIK 72

  Fly    79 QPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPKE 143
            .|||:.||:||||.|||..|.:.||||||||.|||:|||||:|:|||:|.|||||::||..||.|
 Frog    73 NPMDLSTIRKRLEYNYYSKALDCIQDFNTMFTNCYIYNKPGDDIVVMSQELEKVFMEKIAEMPHE 137

  Fly   144 ELELEPVTAKGGKKKQRAPATPKSSSGGAGASTGSGTSSAAVTSGPGSGSTKVSVAASSAQQSGL 208
            |:||..|..:|.|                                     :::.::|.:|::|  
 Frog   138 EIELSVVGNRGVK-------------------------------------SRIKISAVAAEES-- 163

  Fly   209 QGATGAGGGSSSTPGTQPGSGAGGAIAARPVSAMGGTVSSTAGGAPSIPPISTMPPHTVPGSTNT 273
                  ...|...|          ....:.||                   ..|...|.|     
 Frog   164 ------RDDSDYIP----------VCKKKMVS-------------------QKMHRRTFP----- 188

  Fly   274 TTTAMAGGVGGPGAAGANPNAAALMASLLNAGQTGAYPGAPGQTAVNSSSLLDGSTAAVAAAAAA 338
                                 ..::|.:            |.:|.:...|::..||::.:|::. 
 Frog   189 ---------------------CPVIAMM------------PKRTTLVPLSVIRSSTSSHSASSV- 219

  Fly   339 AAAAAAAAGGAAGAAGGAGTIPAVAVNAANAVQAYVNAGVSVGVDAVIPPQQPAKIKKGVKRKAD 403
                                                                 :|:.||:|||||
 Frog   220 -----------------------------------------------------SKVNKGIKRKAD 231

  Fly   404 TTTPT----ANAFESPYTQMDSKSAKIATRRESNR----QVIGKKGSGYNMSPLGVSGVPGLGGL 460
            ||||.    |.:.||..|..:.|..||.:..|..|    ..:....|.:::..:           
 Frog   232 TTTPAVSLIATSCESSPTLSEPKPNKILSGTEKTRSAETSAVDLPDSQHHIHFI----------- 285

  Fly   461 VAGGVAGVAVAKNKEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPM 525
                        ...::.:.||.||.||.|:.||||:.|||||||.|..  ..|.|..|.||.||
 Frog   286 ------------KSNQICEQLKHCNNILNEMMSKKHAEYAWPFYKTVIP--TSLLDCSDAIKHPM 336

  Fly   526 DLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDEPVA 590
            ||.|::.||:|..||...:||:||||:|.|.|||||||::||.|.||:|||||..:|.|||:|:|
 Frog   337 DLATIRDKMENGLYKDTQDFASDVRLMFMNSYKYNPPDNEVVNMARKMQDVFEGMFAKIPDDPLA 401

  Fly   591 NAAHHHGHGHGHGHGHGHGHGHGHGHGHGHGYGGSSSLKHDASDSSSEDSSDTENESNSDEERSA 655
            ..:....:                              |....:|||..||:..:.|:|::||:.
 Frog   402 TQSMVERY------------------------------KTSTEESSSSSSSEQSSSSDSEDERAQ 436

  Fly   656 RLKMLESKLLGLQEEIRKLSEE--ASAKKKAKKKLKEKKKSIGGGSGSGSASHHCHATGGGANAG 718
            .|.:|:.:|..:||:::.|:|.  :.||||::|..|:|||                         
 Frog   437 HLALLQEQLRAVQEQLKALTETPISKAKKKSRKGKKKKKK------------------------- 476

  Fly   719 GAGGPGSGGHGSVSVPGGVGSLGPGGAGGANLNALLGGSLVGHGGAAVAGGVPNVGALHSQVHDV 783
                                                                             
 Frog   477 ----------------------------------------------------------------- 476

  Fly   784 AMAFSQMAGGGAAAGAGFGAGVTAAGASSGGKAGTLAGALAAGAAAGAGGTTAGSGSSKGAKSKG 848
                                                                  ....|..|.|.
 Frog   477 ------------------------------------------------------RERKKLLKRKS 487

  Fly   849 GRGAKGSGAGGVGASNNAAAGNAAGGAAGAAAGAGSVGGVGGAGAAGGGNASKRAKGSSSAGAGG 913
            .:|.|                                              .|:.|         
 Frog   488 CQGQK----------------------------------------------KKKVK--------- 497

  Fly   914 GVGGANASAGGAGARGSSKKKPSQVMNFDSEEEDTAKPMSYDEKRQLSLDINKLPGDKLGRVVHI 978
                 ............:|||...|    |:||:..||||||||||||||||||||:||||:|||
 Frog   498 -----QKELKKRSIFNDAKKKKLHV----SDEEEDVKPMSYDEKRQLSLDINKLPGEKLGRIVHI 553

  Fly   979 IQNREPSLRDSNPDEIEIDFETLKPSTLRELESYVASCLRKKTHKKPSG----KSKDEQMAEKKQ 1039
            ||:|||||:||||:||||||||||.||||.||.||..||||:. ||||.    |||::...||||
 Frog   554 IQSREPSLKDSNPNEIEIDFETLKQSTLRHLEKYVMVCLRKRP-KKPSSIKSLKSKEQLNKEKKQ 617

  Fly  1040 ELEKRLQDVTGQLGASKKTAKKDESASSKVEAVQPANPVSSSSSSSDSSSSSSSDSSSSDSSDSE 1104
            ||||||:||:|||.::||...:||..........|:....||:|||.|..|:|||||||||||||
 Frog   618 ELEKRLRDVSGQLSSAKKPKIQDELNIVPQPIGGPSRLSESSTSSSASDVSNSSDSSSSDSSDSE 682

  Fly  1105 AVLVIPAPTGDGDERP-----PRKKKSRDSNGSNVNNPSINVVMGGNLPSGALSPTTM------- 1157
            :.   |.......:|.     |.|::...|||:   .||....:..||||  ||...:       
 Frog   683 SG---PHHQQYNSKRSLFPENPEKQEKVSSNGT---EPSFAGTVQLNLPS--LSDPLLKNSNDFQ 739

  Fly  1158 ----LMGLDHVVNSNTPTSQMS-NMLGNANPLTAAAMLNNNNKTS--------------LPGSNF 1203
                |..|| ::...:|....| |...:..|  ....|:..||:|              :..::.
 Frog   740 EPAPLFSLD-IMKVLSPLHSPSFNYDSSKRP--TEGCLHQPNKSSSEVLHPSQIEQTFAIKETST 801

  Fly  1204 GGAPAPGNM------------------MHAGAGVPVAGAAV-SASTGQQHNKNGPNDLSKVQPGG 1249
            |....|.::                  .|:.:.:....|.| |...||:......||:.:||...
 Frog   802 GLLTHPESLKDRKNVSNQSTKLKSEISSHSDSPILEDSAKVHSIPLGQKDGTEKANDIDEVQKNA 866

  Fly  1250 PINAALPPHSFAGGTATV-ATSQSS 1273
            .:..:.....|:...||. .|.:||
 Frog   867 KVKTSFCWEVFSKSLATTHVTIKSS 891

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929 76/105 (72%)
COG5076 387..>593 CDD:227408 87/213 (41%)
Bromo_Brdt_II_like 481..581 CDD:99930 59/99 (60%)
BET 951..1015 CDD:293640 55/63 (87%)
BRD4_CDT <2026..2046 CDD:293710
brdtXP_012817895.2 Bromo_Brdt_I_like 28..134 CDD:99929 76/105 (72%)
Bromodomain 293..392 CDD:413371 59/100 (59%)
BET 526..589 CDD:407211 54/62 (87%)
BRD4_CDT 973..1013 CDD:407248
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 119 1.000 Domainoid score I5723
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000322
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22880
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X197
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.010

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