DRSC/TRiP Functional Genomics Resources

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Protein Alignment HNF4A and Hr83

DIOPT Version :10

Sequence 1:NP_000448.3 Gene:HNF4A / 3172 HGNCID:5024 Length:474 Species:Homo sapiens
Sequence 2:NP_649647.1 Gene:Hr83 / 40783 FlyBaseID:FBgn0037436 Length:278 Species:Drosophila melanogaster


Alignment Length:310 Identity:88/310 - (28%)
Similarity:134/310 - (43%) Gaps:87/310 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    60 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSC-RFSRQCVVDKDKRNQCRYCRLKKCFRA 123
            ||:|||:::|||||.|.||||..||:||||:...|:| .....|||||.:||.|..||.::|...
  Fly     7 CAVCGDQSSGKHYGVSCCDGCSCFFKRSVRRGSSYACIALVGNCVVDKARRNWCPSCRFQRCLAV 71

Human   124 GMKKEAVQNER----DRIST----RRSSYEDSSLPSINALLQA---EVLSRQITSPVSGINGDIR 177
            ||...|||.||    .:::.    ||.:....:.||.....||   ::|::.:.:.:.    ..:
  Fly    72 GMNAAAVQEERGPRNQQVALYRTGRRQAPPSQAAPSPTPHSQALHFQILAQILVTCLR----QAK 132

Human   178 AKKIASIADVCES------MKEQLLVL--VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATK 234
            |.:..::.|.|:.      :..::.||  ..|:..|.|..:...|:|:..|...|  |.|..   
  Fly   133 ANEQFALLDRCQQDAIFQVVWSEIFVLRASHWSLDISAMIDGCGDEQLKRLICEA--HQLRA--- 192

Human   235 RSMVFKDVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYL-----KAIIF 294
                  |||                     .:..::.|:|..:||.| :.|||.:     ||.: 
  Fly   193 ------DVL---------------------ELNFMESLILCRKELAI-NAEYAVILGSHSKAAL- 228

Human   295 FDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTL 344
                         |...|..:|.|  :|:         |||:|||.|..|
  Fly   229 -------------ISLARYTLQQS--NYL---------RFGQLLLGLRQL 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HNF4ANP_000448.3 NR_DBD_HNF4A 60..135 CDD:143518 41/79 (52%)
NR_LBD_HNF4_like 151..373 CDD:132729 44/210 (21%)
9aaTAD. /evidence=ECO:0000269|PubMed:30468856 368..376
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 419..447
Hr83NP_649647.1 NR_DBD_PNR_like_2 7..88 CDD:143515 41/80 (51%)
Blue background indicates that the domain is not in the aligned region.

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