DRSC/TRiP Functional Genomics Resources

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Protein Alignment sn and FSCN1

DIOPT Version :9

Sequence 1:NP_001162697.1 Gene:sn / 31717 FlyBaseID:FBgn0003447 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_003079.1 Gene:FSCN1 / 6624 HGNCID:11148 Length:493 Species:Homo sapiens


Alignment Length:491 Identity:200/491 - (40%)
Similarity:301/491 - (61%) Gaps:18/491 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GLINGQHKYMTAETFGFKLNANGASLKKKQLWTLE--PSNTGESIIYLRSHLNKYLSVDQFGNVL 90
            ||||..:||:|||.||||:||:.:||||||:||||  |...|.:.:.|||||.:||:.|:.|||.
Human    15 GLINCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADKDGNVT 79

  Fly    91 CESDERDAGSRFQISISEDGSGRWALKNESRGYFLGGTPDKLVCTAKTPGASEFWTVHLAARPQV 155
            ||.:......||.|...:|  |||:|::|:...:.|||.|:|.|.|:|...:|.|:||:|..|||
Human    80 CEREVPGPDCRFLIVAHDD--GRWSLQSEAHRRYFGGTEDRLSCFAQTVSPAEKWSVHIAMHPQV 142

  Fly   156 NLRSIGRKRFAHLS-ESQDEIHVDANIPWGEDTLFTLEFRAEEGGRYALHTCNNKYLNANGKLQV 219
            |:.|:.|||:|||| ...|||.||.::|||.|:|.||.|:.:   ||::.|.::::|..:|:|..
Human   143 NIYSVTRKRYAHLSARPADEIAVDRDVPWGVDSLITLAFQDQ---RYSVQTADHRFLRHDGRLVA 204

  Fly   220 VCNEDCLFSAEYHGGHLALRDRQGQYLSPIGSKAVLKS-RSSSVTRDELFSLEDSLPQASFIAGL 283
            .......::.|:..|.:|.||.:|:||:|.|....||: :::.|.:||||:||.|..|. .:...
Human   205 RPEPATGYTLEFRSGKVAFRDCEGRYLAPSGPSGTLKAGKATKVGKDELFALEQSCAQV-VLQAA 268

  Fly   284 NLRYVSVKQGVDVTANQDEVGENETFQLEYDWSAHRWALRTTQDRYWCLSAGGGIQATGNRRCAD 348
            |.|.||.:||:|::|||||..:.||||||.|....:.|.||...:||.|:|.||:|:|.:.:.|.
Human   269 NERNVSTRQGMDLSANQDEETDQETFQLEIDRDTKKCAFRTHTGKYWTLTATGGVQSTASSKNAS 333

  Fly   349 ALFELIWHGDGSLSFRANNGKFLATKRSGHLFATSESIEEIAKFYFYLINRPILVLKCEQGFVGY 413
            ..|::.|. |..::.||:||||:.:|::|.|.|:.|:..:...|...||||||:|.:.|.||:|.
Human   334 CYFDIEWR-DRRITLRASNGKFVTSKKNGQLAASVETAGDSELFLMKLINRPIIVFRGEHGFIGC 397

  Fly   414 R-TPGNLKLECNKATYETILVERAQKGLVHLKAHSGKYWRIEGES-ISVDADAPSDGFFLELREP 476
            | ..|.  |:.|:::|:...:| ...|..::|..:||||.:..:| ::...|.|.| ||.|..:.
Human   398 RKVTGT--LDANRSSYDVFQLE-FNDGAYNIKDSTGKYWTVGSDSAVTSSGDTPVD-FFFEFCDY 458

  Fly   477 TRICIRSQQGKYLGATKNGAFKLLDDGTDSATQWEF 512
            .::.|: ..|:||.....|..|...:..|.|:.||:
Human   459 NKVAIK-VGGRYLKGDHAGVLKASAETVDPASLWEY 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snNP_001162697.1 Fascin 33..147 CDD:283843 55/115 (48%)
Fascin 152..270 CDD:238160 48/119 (40%)
Fascin 275..394 CDD:238160 47/118 (40%)
Fascin 399..512 CDD:238160 36/114 (32%)
FSCN1NP_003079.1 Fascin 21..134 CDD:399343 55/114 (48%)
Fascin 139..256 CDD:238160 48/119 (40%)
Fascin 268..378 CDD:399343 46/110 (42%)
Fascin 383..493 CDD:238160 36/114 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165150925
Domainoid 1 1.000 114 1.000 Domainoid score I6090
eggNOG 1 0.900 - - E1_2CMA3
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 358 1.000 Inparanoid score I2228
Isobase 1 0.950 - 0 Normalized mean entropy S6526
OMA 1 1.010 - - QHG52513
OrthoDB 1 1.010 - - D1419861at2759
OrthoFinder 1 1.000 - - FOG0002949
OrthoInspector 1 1.000 - - otm41025
orthoMCL 1 0.900 - - OOG6_104023
Panther 1 1.100 - - LDO PTHR10551
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4757
SonicParanoid 1 1.000 - - X1949
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.750

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