DRSC/TRiP Functional Genomics Resources

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Protein Alignment sn and Fscn2

DIOPT Version :9

Sequence 1:NP_001162697.1 Gene:sn / 31717 FlyBaseID:FBgn0003447 Length:512 Species:Drosophila melanogaster
Sequence 2:XP_006533322.1 Gene:Fscn2 / 238021 MGIID:2443337 Length:519 Species:Mus musculus


Alignment Length:518 Identity:192/518 - (37%)
Similarity:288/518 - (55%) Gaps:46/518 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GLINGQHKYMTAETFGFKLNANGASLKKKQLWTLEPS-NTGESIIYLRSHLNKYLSVDQFGNVLC 91
            ||:|...:|:|||:||||:||:.||||:||:|.|||. ..|.::::..|||.:|||.::.|.|.|
Mouse    15 GLVNDADRYLTAESFGFKVNASAASLKRKQIWVLEPDPGQGTAVLFRSSHLGRYLSAEEDGRVAC 79

  Fly    92 ESDERDAGSRFQISISEDGSGRWALKNESRGYFLGGTPDKLVCTAKTPGASEFWTVHLAARPQVN 156
            |.|:.....||.:....|  |||.|::|..|.|.||..|:|.|.|.....:|.||||||..||.:
Mouse    80 EMDQPGRDCRFLVLPQPD--GRWVLQSEPHGRFFGGIEDRLSCFATAISPAELWTVHLAIHPQAH 142

  Fly   157 LRSIGRKRFAHLSESQDEIHVDANIPWGEDTLFTLEFRAEEGGRYALHTCNNKYLNANGKLQVVC 221
            |.|:.|:|:.||...:||:..|.::|||.|.|.||.|::.   ||.|.:.:::||.::|:|....
Mouse   143 LLSVSRRRYVHLCLQEDEMAADGDMPWGVDALVTLIFQSR---RYCLKSYDSRYLRSDGRLVWEP 204

  Fly   222 NEDCLFSAEYHGGHLALRDRQGQYLSPIGSKAVLKS-RSSSVTRDELFSLEDSLPQASFIAGLNL 285
            .....::.|:..|.||.:|..|:||:|:|....||: |::..::||||.||.|.||...:|. |.
Mouse   205 EAHACYTLEFKAGKLAFKDCDGRYLAPVGPAGTLKAGRNTRPSKDELFDLEQSHPQVVLVAA-NR 268

  Fly   286 RYVSVKQGVDVTANQDEVGENETFQLEYDWSAHRWALRTTQDRYWCLSAGGGIQATGNRRCADAL 350
            ||:||:||::|:|||||...:|||.::.|....:....::...||.|...||||||..:..|:.:
Mouse   269 RYISVRQGINVSANQDEELGHETFLMQIDQETKKCTFYSSTGGYWTLVTHGGIQATATQVSANTM 333

  Fly   351 FELIWHGDGSLSFRANNGKFLATKRSGHLFATSESIEEIA------------------------- 390
            ||:.||| ..::.:|:||:|:..|::|.|.|.|:.:.|.:                         
Mouse   334 FEIEWHG-RRVALKASNGRFVCMKKNGQLAAISDFVGEHSLPSTAWKEQMGVGSGQSTSPSPAGE 397

  Fly   391 --KFYFYLINRPILVLKCEQGFVGYRTPGNLKLECNKATYETILVERAQKGLVHLKAHSGKYWRI 453
              .|...|||||:|||:...|||.:|. |:.:|:.|::||:...:. .:.|...::...|.:|..
Mouse   398 DELFTLKLINRPLLVLRGLDGFVCHRR-GSNQLDTNRSTYDVFHLS-FRDGAYQIRGRGGGFWYT 460

  Fly   454 EGE-SISVDADAPSDGFFLELREPTRICIRSQQGKYLGATKNGAFKLLDDGTD---SATQWEF 512
            ... |:..|.|...| |..|.||..|:.||:..||||   :.||..||....|   ....||:
Mouse   461 GSHGSVCSDGDLAED-FLFEFRERGRLAIRALSGKYL---RGGASGLLRADADLPVGEALWEY 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snNP_001162697.1 Fascin 33..147 CDD:283843 50/114 (44%)
Fascin 152..270 CDD:238160 43/118 (36%)
Fascin 275..394 CDD:238160 46/145 (32%)
Fascin 399..512 CDD:238160 38/116 (33%)
Fscn2XP_006533322.1 Fascin 20..133 CDD:368822 50/114 (44%)
Fascin 138..254 CDD:238160 43/118 (36%)
Fascin 266..373 CDD:368822 42/108 (39%)
Fascin 408..519 CDD:238160 38/116 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841040
Domainoid 1 1.000 115 1.000 Domainoid score I6012
eggNOG 1 0.900 - - E1_2CMA3
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H22722
Inparanoid 1 1.050 358 1.000 Inparanoid score I2209
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52513
OrthoDB 1 1.010 - - D1419861at2759
OrthoFinder 1 1.000 - - FOG0002949
OrthoInspector 1 1.000 - - otm43095
orthoMCL 1 0.900 - - OOG6_104023
Panther 1 1.100 - - O PTHR10551
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4757
SonicParanoid 1 1.000 - - X1949
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.800

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