DRSC/TRiP Functional Genomics Resources

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Protein Alignment sws and crp

DIOPT Version :10

Sequence 1:NP_511075.3 Gene:sws / 31716 FlyBaseID:FBgn0003656 Length:1425 Species:Drosophila melanogaster
Sequence 2:NP_417816.1 Gene:crp / 947867 ECOCYCID:EG10164 Length:210 Species:Escherichia coli


Alignment Length:211 Identity:36/211 - (17%)
Similarity:88/211 - (41%) Gaps:54/211 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   507 TLITEGNADDVCVWFVMTGTLAVYQSNQDATRAKQDKSDMLIHFVHPGEIVGGLAML-TGEASAY 570
            |||.:|...:. :::::.|::||...:::.       .:|::.:::.|:.:|.|.:. .|:..:.
E. coli    29 TLIHQGEKAET-LYYIVKGSVAVLIKDEEG-------KEMILSYLNQGDFIGELGLFEEGQERSA 85

  Fly   571 TIRSRSITRIAFIRRAAIYQIMRQRPRIVLDLGNGVVRRLSPLVRQCDYALDWIFLESGRAVYRQ 635
            .:|:::...:|.|......|:::..|.|::.|...:.|||.                     ...
E. coli    86 WVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQ---------------------VTS 129

  Fly   636 DESSDSTYIVLSGRMRSVI----------THPGGKKEIVGEYGKGDLVG--------IVEMITET 682
            ::..:..::.::||:...:          |||.|.:..:.....|.:||        |::|:.:.
E. coli   130 EKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQ 194

  Fly   683 S------RTTTVMAVR 692
            :      :|..|...|
E. coli   195 NLISAHGKTIVVYGTR 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
swsNP_511075.3 CAP_ED 174..295 CDD:237999
Crp 484..>610 CDD:440428 20/103 (19%)
CAP_ED 620..719 CDD:237999 14/97 (14%)
Pat_PNPLA6_PNPLA7 935..1240 CDD:132864
crpNP_417816.1 PRK11753 1..210 CDD:236969 35/209 (17%)
Blue background indicates that the domain is not in the aligned region.

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