DRSC/TRiP Functional Genomics Resources

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Protein Alignment sws and fnr

DIOPT Version :10

Sequence 1:NP_511075.3 Gene:sws / 31716 FlyBaseID:FBgn0003656 Length:1425 Species:Drosophila melanogaster
Sequence 2:NP_415850.1 Gene:fnr / 945908 ECOCYCID:EG10325 Length:250 Species:Escherichia coli


Alignment Length:175 Identity:38/175 - (21%)
Similarity:67/175 - (38%) Gaps:63/175 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 LMAGDYLFKITDPDDSVYIVQSGMINVYISNADGSTLSLKTVRKGESVT------SLLSFIDVLS 253
            :..|..|||..|...|:|.::||.|..|.....|.          |.:|      .|:.|..:.|
E. coli    52 IQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGD----------EQITGFHLAGDLVGFDAIGS 106

  Fly   254 G-NPSYYKTVTAKAIEKSVVIRLPMQAFEEVFQDNPDV---MIRVI---------QVIMI----- 300
            | :||:     |:|:|.|:|..:|.:..:::....|::   |:|::         .::::     
E. coli   107 GHHPSF-----AQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNA 166

  Fly   301 --RLQRVLFTALR----------------------NYLGLNAELV 321
              ||...::...|                      |||||..|.:
E. coli   167 EERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETI 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
swsNP_511075.3 CAP_ED 174..295 CDD:237999 29/109 (27%)
Crp 484..>610 CDD:440428
CAP_ED 620..719 CDD:237999
Pat_PNPLA6_PNPLA7 935..1240 CDD:132864
fnrNP_415850.1 PRK11161 11..245 CDD:183004 38/175 (22%)
Blue background indicates that the domain is not in the aligned region.

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