DRSC/TRiP Functional Genomics Resources

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Protein Alignment sws and pnpla7a

DIOPT Version :9

Sequence 1:NP_511075.3 Gene:sws / 31716 FlyBaseID:FBgn0003656 Length:1425 Species:Drosophila melanogaster
Sequence 2:NP_001074124.1 Gene:pnpla7a / 791173 ZFINID:ZDB-GENE-070112-1812 Length:328 Species:Danio rerio


Alignment Length:285 Identity:109/285 - (38%)
Similarity:170/285 - (59%) Gaps:27/285 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 QYVSKQITATV---YMYFALVMMSLLFIAWFLYFKRMARLRLRDEIARSISTVTNSSGDMRGLRF 86
            |:|.:::..|:   .:..|.|.:.|:.|...|.::|.........:.|              .||
Zfish    24 QFVEERMQTTMLTGVLIGAAVAVCLIGITVLLLYRRYKHASQEAGVPR--------------YRF 74

  Fly    87 RKRDKMLFYGRRMLRKMKNVS----GQMYSSGKGYKRRAVMRFARRILQLRRDNMPLEMRTVEPP 147
            |||||:|||||:::||::.:|    ..:.|..:..||..|:..|||||::|::  |..::..|||
Zfish    75 RKRDKVLFYGRKIMRKVQTLSSTPTSTLVSKQRSRKRPKVLSIARRILRIRKE--PPTLQPKEPP 137

  Fly   148 AEYLEETIEGSD----RVPPDALYMLQSIRIFGHFEKPVFLRLCKHTQLLELMAGDYLFKITDPD 208
            ...||..:...|    .:|.:.||||:::|:.||||||:||.||:|...:||..|:.|||..|.|
Zfish   138 PSLLEADLTEFDVQNSNLPSEVLYMLKNVRVLGHFEKPLFLELCRHMVFVELQEGEGLFKPGDDD 202

  Fly   209 DSVYIVQSGMINVYISNADGSTLSLKTVRKGESVTSLLSFIDVLSGNPSYYKTVTAKAIEKSVVI 273
            ||:|:||.|.:.:.|...||:.|.:|.|..|:||.||||.:|:::|.|:.||||:|:|..:|.::
Zfish   203 DSIYVVQDGRLELCILEIDGTELVVKDVLPGDSVHSLLSILDIITGYPAPYKTVSARAAVRSTIL 267

  Fly   274 RLPMQAFEEVFQDNPDVMIRVIQVI 298
            |||..||:.||:..|:.::|||||:
Zfish   268 RLPASAFQSVFEKYPETLVRVIQVL 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
swsNP_511075.3 Crp 168..>310 CDD:223736 64/131 (49%)
CAP_ED 174..295 CDD:237999 57/120 (48%)
Crp 483..>611 CDD:223736
CAP_ED 484..602 CDD:237999
CAP_ED 620..719 CDD:237999
Crp 624..>727 CDD:223736
Pat_PNPLA6_PNPLA7 935..1240 CDD:132864
RssA 940..1222 CDD:224666
pnpla7aNP_001074124.1 Crp 162..>293 CDD:223736 64/131 (49%)
CAP_ED 168..289 CDD:237999 57/120 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594075
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R845
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.960

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