DRSC/TRiP Functional Genomics Resources

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Protein Alignment sws and Cnbd2

DIOPT Version :9

Sequence 1:NP_511075.3 Gene:sws / 31716 FlyBaseID:FBgn0003656 Length:1425 Species:Drosophila melanogaster
Sequence 2:NP_081861.2 Gene:Cnbd2 / 70873 MGIID:1918123 Length:673 Species:Mus musculus


Alignment Length:593 Identity:110/593 - (18%)
Similarity:208/593 - (35%) Gaps:171/593 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 EHTLSDP--NPNPDGSF-----HGTTNLFTEVHGDAPNADLFHQQQQQHSVGNLSTRRSSITLMA 449
            |:.:.:|  ..:||.||     .|..:..||        |...|:      |:...|..|||...
Mouse   135 EYQIIEPVHKKHPDFSFWDKKKQGRISFVTE--------DFAAQE------GHFPPRAISITQKK 185

  Fly   450 PD-GSHSCLQTPGVTTSIDM-RLVQSSAVDSLRKELGLSEEDSHIIEPFVELRELEPNVTLITEG 512
            |. .:|..:|        |: .::|  |:|..|   ..:|....::...:..........::.:|
Mouse   186 PSWRTHQEIQ--------DLCNILQ--ALDCYR---SYTESLQLLLAKVIRFERFGRRRVIVKKG 237

  Fly   513 NADDVCVWFVMTGTLAVYQSNQDATRAKQDKSDMLIHFVHPGEIVGGLAMLTGEASAYTIRSRSI 577
            ...: ..:|:..||:|:.: ::|.:.|..|....|:   |.|...|.:.:|     :.|:||.::
Mouse   238 QMGN-SFYFIYLGTVAITE-DEDGSSAFLDPHPTLL---HRGGSFGEMGLL-----STTVRSATV 292

  Fly   578 TRIAFIRRAAIYQIMRQRPRIVLDLGNGVVRRLSPLV-RQCDYA------LD----------WIF 625
            .            .|.:...:|:|..:.|..:|...| ::..|.      ||          |..
Mouse   293 V------------CMEETEFLVVDREDFVANKLGDEVQKETQYRYNFFRNLDIFQSWSEEKLWKL 345

  Fly   626 LESGRA---VYRQDESSD---STYIVLSGRMRSVITHPGGKKEIVGEYGKGDLVGIVEMITETSR 684
            :..||.   .|.|..|.|   |.:|....:         |..||:.....||.....:.:.:...
Mouse   346 VALGRIERFSYGQMVSKDFMNSAFITFICQ---------GNCEILRLVALGDCSAYYKWVWQQLE 401

  Fly   685 TT--TVMAVRDSELAKLPEGLFNAIKLR-YPIVVTKLISFLSHRFLGSMQTRSGSGAPGAPVEAN 746
            ..  ..:.:.|:|::  |:..|..:::: ||     |..|...:.|...:.|...|     ::.:
Mouse   402 LLDHKPLRIHDNEIS--PKERFKELQIKSYP-----LQDFTYLKLLRLQKAREQQG-----IDFH 454

  Fly   747 PVTHKYSTVALVPITDEVPMTPFTYELYHSLCAIGPVLR------LTSDVVRKQLGSNIFEAANE 805
            ...:|        :.:.:|.            .:||.::      :...:|..:.|....||...
Mouse   455 GKINK--------VENTLPK------------LLGPKIKSRFGHLVKCSMVNTKFGELPKEAIVG 499

  Fly   806 YRLTSWLAQQEDRNIITLYQCDSSLSAWTQRCMRQADVILIVGLGDRSHLVGKFEREIDRLAMRT 870
            ..:.  :.:.|:..|:.|:|      |:.....|.....:::.||.....|.| |:..|.:...|
Mouse   500 VYMK--IHKTEEGEIVGLHQ------AFVPEIQRDCRPFILLSLGSELIQVRK-EKFYDMVDEET 555

  Fly   871 QKELVLL---YPEASNAKPANTLSWLNARPWVTKHHHVLCVKRIFTRKSQYRI--NDLYSRVLLS 930
            :.:::.:   ||...:                      ||  :.|.:::.|.:  .||..  ||.
Mouse   556 RAKIIKMDVDYPSDED----------------------LC--QSFLKENDYIVFRKDLLR--LLV 594

  Fly   931 EPNMHSDF 938
            ||...|.|
Mouse   595 EPLNKSPF 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
swsNP_511075.3 Crp 168..>310 CDD:223736
CAP_ED 174..295 CDD:237999
Crp 483..>611 CDD:223736 21/127 (17%)
CAP_ED 484..602 CDD:237999 19/117 (16%)
CAP_ED 620..719 CDD:237999 22/123 (18%)
Crp 624..>727 CDD:223736 21/111 (19%)
Pat_PNPLA6_PNPLA7 935..1240 CDD:132864 2/4 (50%)
RssA 940..1222 CDD:224666
Cnbd2NP_081861.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..89
Crp 200..>353 CDD:223736 33/179 (18%)
CAP_ED 211..308 CDD:237999 20/118 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0664
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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