DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sws and PRKG2

DIOPT Version :9

Sequence 1:NP_511075.3 Gene:sws / 31716 FlyBaseID:FBgn0003656 Length:1425 Species:Drosophila melanogaster
Sequence 2:XP_016863902.1 Gene:PRKG2 / 5593 HGNCID:9416 Length:774 Species:Homo sapiens


Alignment Length:392 Identity:75/392 - (19%)
Similarity:137/392 - (34%) Gaps:112/392 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   358 QMNLMQSAVSGTGSSGVSVTVTRPPSSPSR--------HSR---------EEHTLS-DPNPNPDG 404
            |:|.:|..|...|.|.:..:..:.|....|        |||         |..|.: |.|..|:.
Human    78 QLNKLQDVVHMQGGSPLQASPDKVPLEVHRKTSGLVSLHSRRGAKAGVSAEPTTRTYDLNKPPEF 142

  Fly   405 SFHGTTNLFTEVHGDAPNADLFHQQQQQHSVGNLSTRRSSITLMAPDGSHSCLQTPGVTTSIDMR 469
            ||                        ::..|...|:.:..||                       
Human   143 SF------------------------EKARVRKDSSEKKLIT----------------------- 160

  Fly   470 LVQSSAVDSLRKELGLSEEDSHIIEPFVEL---RELEPNVTLITEGNADDVCVWFVMTGTLAVYQ 531
                   |:|.|...|...|...|:..||.   |..:....:|.:|...: .::.:..|.|.|:|
Human   161 -------DALNKNQFLKRLDPQQIKDMVECMYGRNYQQGSYIIKQGEPGN-HIFVLAEGRLEVFQ 217

  Fly   532 SNQDATRAKQDKSDMLIHFVHPGEIVGGLAML-----TGEASAYT-IRSRSITRIAF---IRRAA 587
                        .:.|:..:......|.||:|     |....|.| :::.::.|..|   :||.|
Human   218 ------------GEKLLSSIPMWTTFGELAILYNCTRTASVKAITNVKTWALDREVFQNIMRRTA 270

  Fly   588 IYQIMRQRP--RIVLDLGNGVVRRLSPLVRQCDYALDWIFLESGRAVYRQDESSDSTYIVLSGRM 650
            ..:..:.|.  |.|..|.|....:|:.:: .|   |:..:.:.|..:.|:.|...:.:|:..|::
Human   271 QARDEQYRNFLRSVSLLKNLPEDKLTKII-DC---LEVEYYDKGDYIIREGEEGSTFFILAKGKV 331

  Fly   651 RSVITHPG-GKKEIVGEYGKGDLVGIVEMITETSRTTTVMA--------VRDSELAKLPEGLFNA 706
            :...:..| .:.:::....||:..|...:|::..|:..::|        |.|.|......|.|..
Human   332 KVTQSTEGHDQPQLIKTLQKGEYFGEKALISDDVRSANIIAEENDVACLVIDRETFNQTVGTFEE 396

  Fly   707 IK 708
            ::
Human   397 LQ 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
swsNP_511075.3 Crp 168..>310 CDD:223736
CAP_ED 174..295 CDD:237999
Crp 483..>611 CDD:223736 30/141 (21%)
CAP_ED 484..602 CDD:237999 28/131 (21%)
CAP_ED 620..719 CDD:237999 18/98 (18%)
Crp 624..>727 CDD:223736 17/94 (18%)
Pat_PNPLA6_PNPLA7 935..1240 CDD:132864
RssA 940..1222 CDD:224666
PRKG2XP_016863902.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0664
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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