DRSC/TRiP Functional Genomics Resources

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Protein Alignment sws and Prkar2a

DIOPT Version :10

Sequence 1:NP_511075.3 Gene:sws / 31716 FlyBaseID:FBgn0003656 Length:1425 Species:Drosophila melanogaster
Sequence 2:NP_062137.1 Gene:Prkar2a / 29699 RGDID:3393 Length:401 Species:Rattus norvegicus


Alignment Length:389 Identity:81/389 - (20%)
Similarity:139/389 - (35%) Gaps:119/389 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 GVSVTVTR--PPS---------SPSRHSREEHTLSDPNPNPDGSFHGTTNLFT-------EVHGD 419
            |.:|.|.|  ||.         :..|.:|.:.  ||....|..:||...:...       |...|
  Rat    16 GYTVEVLRQQPPDLVDFAVEYFTRLREARRQE--SDSFIAPPTTFHAQESSGVPVIEEDGESESD 78

  Fly   420 APNADLFHQQQQQHSVGNLSTRRSSITLMAPDGSHSCLQT--PGVTTSIDMRLV----------- 471
            :.:.||      :..:.:..|||.|:          |.:|  |......|.|:|           
  Rat    79 SDDEDL------EVPIPSKFTRRVSV----------CAETFNPDEEEDNDPRVVHPKTDEQRYRL 127

  Fly   472 QSSAVDSLR-KELGLSEEDSHIIEPFVELRELEPNVTLITEGNADDVCVWFVM---TGTLAVYQS 532
            |.:..|.|. |.|. .|:.|.:::...| :.::.:..:|.:|  ||...::|:   |..:.|.:.
  Rat   128 QEACKDILLFKNLD-QEQLSQVLDAMFE-KIVKTDEHVIDQG--DDGDNFYVIERGTYDILVTKD 188

  Fly   533 NQDATRAKQDKSDMLIHFVHPGEIVGGLAMLTGEASAYTIRSRS------ITRI----------- 580
            ||..:..:.|.....          |.||::.....|.||.:.|      :.|:           
  Rat   189 NQTRSVGQYDNRGSF----------GELALMYNTPRAATIVATSDGSLWGLDRVTFRRIIVKNNA 243

  Fly   581 -------AFIRRAAIYQI--MRQRPRIVLDLGNGVVRRLSPLVRQCDYALDWIFLESGRAVYRQD 636
                   :||....:::.  |.:|.:||..:|..:.:                   .|..:..|.
  Rat   244 KKRKMFESFIESVPLFKSLEMSERMKIVDVIGEKIYK-------------------DGERIITQG 289

  Fly   637 ESSDSTYIVLSG------RMRSVITHPGGKKEI-VGEYGKGDLVGIVEMITETSRTTTVMAVRD 693
            |.:||.||:.||      |.::.....||.:|: :....||...|.:.::|...|..:..||.|
  Rat   290 EKADSFYIIESGEVSILIRSKTKTNKNGGNQEVEIAHCHKGQYFGELALVTNKPRAASAYAVGD 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
swsNP_511075.3 CAP_ED 174..295 CDD:237999
Crp 484..>610 CDD:440428 28/154 (18%)
CAP_ED 620..719 CDD:237999 21/81 (26%)
Pat_PNPLA6_PNPLA7 935..1240 CDD:132864
Prkar2aNP_062137.1 Dimerization and phosphorylation 2..135 29/136 (21%)
DD_RIIalpha_PKA 4..44 CDD:438524 7/27 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 55..85 6/35 (17%)
CAP_ED 136..248 CDD:237999 23/125 (18%)
CAP_ED 258..379 CDD:237999 26/115 (23%)
Blue background indicates that the domain is not in the aligned region.

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