DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sws and Prkg2

DIOPT Version :10

Sequence 1:NP_511075.3 Gene:sws / 31716 FlyBaseID:FBgn0003656 Length:1425 Species:Drosophila melanogaster
Sequence 2:NP_037144.1 Gene:Prkg2 / 25523 RGDID:3401 Length:762 Species:Rattus norvegicus


Alignment Length:392 Identity:73/392 - (18%)
Similarity:136/392 - (34%) Gaps:112/392 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   358 QMNLMQSAVSGTGSSGVSVTVTRPPSSPSR--------HSRE--------EHT--LSDPNPNPDG 404
            |:|.:|..:...|.|.:..:..:.|....|        |||.        |.|  ..|.|..|:.
  Rat    78 QLNKLQDVIHVQGGSPLQASPDKVPLDVHRKTSGLVSLHSRRGAKAGVSAEPTSRTYDLNKPPEF 142

  Fly   405 SFHGTTNLFTEVHGDAPNADLFHQQQQQHSVGNLSTRRSSITLMAPDGSHSCLQTPGVTTSIDMR 469
            ||                        ::..|...|:.:..||                       
  Rat   143 SF------------------------EKARVRKDSSEKKLIT----------------------- 160

  Fly   470 LVQSSAVDSLRKELGLSEEDSHIIEPFVEL---RELEPNVTLITEGNADDVCVWFVMTGTLAVYQ 531
                   |:|.|...|...|...|:..||.   |..:....::.:|...: .::.:..|.|.|:|
  Rat   161 -------DALNKNQFLKRLDPQQIKDMVECMYGRNYQQGSYIVKQGEPGN-HIFVLAEGRLEVFQ 217

  Fly   532 SNQDATRAKQDKSDMLIHFVHPGEIVGGLAML-----TGEASAYT-IRSRSITRIAF---IRRAA 587
                        .:.|:..:......|.||:|     |....|.| :::.::.|..|   :||.|
  Rat   218 ------------GEKLLSSIPMWTTFGELAILYNCTRTASVKAITNVKTWALDREVFQNIMRRTA 270

  Fly   588 IYQIMRQRP--RIVLDLGNGVVRRLSPLVRQCDYALDWIFLESGRAVYRQDESSDSTYIVLSGRM 650
            ..:....|.  |.|..|.|....:|:.:: .|   |:..:.:.|..:.|:.|...:.:|:..|::
  Rat   271 QARDEEYRNFLRSVSLLKNLPEDKLTKII-DC---LEVEYYDKGDYIIREGEEGSTFFILAKGKV 331

  Fly   651 RSVITHPG-GKKEIVGEYGKGDLVGIVEMITETSRTTTVMA--------VRDSELAKLPEGLFNA 706
            :...:..| .:.:::....||:..|...:|::..|:..::|        |.|.|......|.|:.
  Rat   332 KVTQSTEGHDQPQLIKTLQKGEYFGEKALISDDVRSANIIAEENDVACLVIDRETFNQTVGTFDE 396

  Fly   707 IK 708
            ::
  Rat   397 LQ 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
swsNP_511075.3 CAP_ED 174..295 CDD:237999
Crp 484..>610 CDD:440428 29/139 (21%)
CAP_ED 620..719 CDD:237999 18/98 (18%)
Pat_PNPLA6_PNPLA7 935..1240 CDD:132864
Prkg2NP_037144.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 112..138 6/25 (24%)
cGMP-binding, high affinity, cAMP-binding, moderate affinity. /evidence=ECO:0000250|UniProtKB:Q13237 168..283 25/127 (20%)
CAP_ED 168..273 CDD:237999 24/117 (21%)
cGMP-binding, high affinity, cAMP-binding, low affinity. /evidence=ECO:0000250|UniProtKB:Q13237 286..416 22/117 (19%)
CAP_ED 286..401 CDD:237999 22/117 (19%)
STKc_cGK 459..718 CDD:270724
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 740..762
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.