DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubr3 and PRT6

DIOPT Version :9

Sequence 1:NP_001259317.1 Gene:Ubr3 / 31713 FlyBaseID:FBgn0260970 Length:2236 Species:Drosophila melanogaster
Sequence 2:NP_001318457.1 Gene:PRT6 / 830916 AraportID:AT5G02310 Length:2006 Species:Arabidopsis thaliana


Alignment Length:2529 Identity:491/2529 - (19%)
Similarity:816/2529 - (32%) Gaps:1003/2529 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 VAAAAAPPPPPPRTGPTTTTSSGTAAESGAASAL--SDD---AGAKPSFFFGASSFSLRSRKEVA 159
            :|:...|.....:.|......:..|..|...|||  :||   .|.|.:          |.|...:
plant    23 LASVGVPKKYRSKRGLVEFVRANPAKISELVSALLPTDDDVKLGLKEA----------RERPRKS 77

  Fly   160 ALINTECCRGSPTPDLDSIMDTLFNPGTPIDNLDNIEWIRWLIAGGRTPQEFVKIVRSYDNHAKC 224
            |:        |||      |...|.     ::::.::|:.:......:.:...|:  :.|....|
plant    78 AV--------SPT------MKKRFR-----ESMNMLQWLMFQDEPDVSLRNLAKL--NLDQRGVC 121

  Fly   225 GLVWVPHVVAYRCRTCGISPCMSICRDCFKKGNHTNHDFNMFLSQAGGACDCGDTSVMKAEGFCS 289
            |.||..:.:|||||||...|..:||..||:.|:|.:||:::..: .||.|||||.:..|.:||||
plant   122 GSVWGQNDIAYRCRTCENDPTCAICVPCFQNGDHNSHDYSIIYT-GGGCCDCGDETAWKPDGFCS 185

  Fly   290 DHGINNRVNRDPVPNNLLAVAEAIMPKL--LF-----RLL------QHFREHSDTPLEVQAITSY 341
            :|..:.::.  |:..||   |.::.|.|  ||     :||      |.....:||.:.:|.:::.
plant   186 NHKGSEQIR--PLSENL---ANSVGPILDALFTCWNNKLLSAESSGQKGARSNDTLVILQKMSNE 245

  Fly   342 SCEEFANMLIDLNNMGEIMRKVMTRTLINPEVYAFFMEAPCQDTRNGRFLKANREKYEDAVNRFP 406
            .......||::.:...|.:...::|.:|:.......:            |||.|...:|.:.:. 
plant   246 LTFIVVEMLLEFSMSSESLLSFVSRRIISSSGLLSIL------------LKAERFLDQDVMKKL- 297

  Fly   407 NPEPPDEYRDLPALGDKLVHTTLLEEFIFWTFKFEFPQTLVCF-------LLNMLPDQDYKEH-L 463
                .|.:  |..:||.:             ||.||.:..|.:       ::....|..:|:: |
plant   298 ----HDLF--LKLIGDPV-------------FKCEFAKAFVSYYPVVISEVVKQGTDNAFKKYPL 343

  Fly   464 TRTFVMHYSRIPSVLEMSRDPDTLSNRVVHMSVQLFSNESLALKMVNELSLLHVMIISLKLMMSK 528
            ..||                           |||:.:..:|...:|.|::||.:::..|    |.
plant   344 LSTF---------------------------SVQILTVPTLTPFLVKEMNLLAMLLGCL----SD 377

  Fly   529 ILIQNTLHDPNKNFHFVIDCTRQVMKDHCYWPLVSDFNNVLSHESVALVFLRDD-NLIDMWFQFL 592
            |.:..:..|.      ::..|:..........::.|...|:||..|:.....:. .|...|...|
plant   378 IFVSCSGEDG------LLQATKLERLCETSERVIGDLKFVMSHAIVSKYATHEHRELSRSWLTLL 436

  Fly   593 QMLQGMNVNVRETASHVEFEPNSY----------------------YAAFS-------------- 621
            ...||||...|||...:: |.|.|                      |:|.|              
plant   437 TFAQGMNPLKRETGIPID-EENDYMHLFFVLGHSIAVIHSLLVNGTYSAASDEEIENDRNAKEEF 500

  Fly   622 --CELEASAYPMWSIISHLQ-----------------------DGTHAHLAKKII---------- 651
              |:.:...|.....:||..                       |..||.|....|          
plant   501 DKCDGDGERYAKVGRLSHEDSVCTAIVSSSSFDSSMASEVHKIDPFHALLPSSAIYLIRECLKVL 565

  Fly   652 ----------------------------------------------------------------- 651
                                                                             
plant   566 ETCLGNDEGISKFLCKLSSSSGRNIPESKMSWPRRDLLNVETGGSVSSNLASSSRDPSTGLSPLC 630

  Fly   652 ----------NYC--------------------------------VTTLHEWLDSIYFMEARLSM 674
                      |.|                                :..|.:|.|..|.:.::   
plant   631 GDIQTNLSLDNVCGPYGVVQTDVTADSKRVSCNSADLTKNASGLRILGLCDWPDIHYDVSSQ--- 692

  Fly   675 EEMMQASFHFPLHRYLAAFVCQAV--------TKMGISLNDVLPSRPY------------LLPLL 719
                ..|.|.||||.|:..:.:|:        :..|:|::..:|...:            ...|:
plant   693 ----AISVHLPLHRLLSLLIQKALRICYGESASYNGVSISHEIPHADFFSSVIGDFHPCGFSALV 753

  Fly   720 MIHPLRVQSFFYEILAGKWVRNGLQIKGQAMTYIQANFCNSMADMDLFFLQICATNLPQYFFLQN 784
            |.|.|:::.|..:::||.|.:||.........|....:.....::|||.||.||...|...::..
plant   754 MEHVLQIRVFCAQVIAGMWKKNGDSALVSCEWYRSVRWSEQGLELDLFLLQCCAALAPADSYVDK 818

  Fly   785 TIELFDVGQWLETAPLKQPQKAEQSSMLEGFLTFLATLVTSRTNLGNDEATQCIIEISALLATEN 849
            .:..|.:..:|...|  ......:..:::..|..|..::..|...|...|.....||...|||.:
plant   819 LLSRFGLSSYLSLNP--DITNEYEPVLVQEMLGLLIQILQERRFCGLSTAESLRREIIFKLATGD 881

  Fly   850 KTHSQLLELMPERSGNVHTKNFETFLKKLSVYKAPSSGSENLEQGLFTPIDEVWEKHYDPLHVLL 914
            .|||||::.:|.....  :...:..|..:|||..||    .:.||.::.....| |..|..|...
plant   882 FTHSQLVKSLPRDLSK--SDELQEVLDDVSVYCNPS----GMNQGKYSLQSSCW-KELDLYHPRW 939

  Fly   915 RAVHRRDFQSSLDRFTNYV---KSKDKMPASGNLWPPFRLPHALPATSSFSDPCKILNSRIFHST 976
            ::   ||.||:.:||:.|.   ....::|....::||.:   .|....:.....:|::|.:::: 
plant   940 QS---RDLQSAEERFSRYCGVSALTTQLPRWRMIYPPLK---GLARIGTCKATFQIISSALYYA- 997

  Fly   977 ILSIFFRAVHTRDVSEHLLALAVFLLEIAVETSDDVGSGTGDRAPPALAAVVESSSGPGYHGYGT 1041
                                               :.|||                         
plant   998 -----------------------------------LQSGT------------------------- 1002

  Fly  1042 GRHEPPKLFHCYPTDNLSCNLRHVVKKVSLKSRDPQ-VITSSYRSNPFYSDLDFEVEADPEQSMR 1105
                                        |:|||.|. |:.::.:    ...|..::.....||  
plant  1003 ----------------------------SVKSRAPDGVLITALQ----LLSLSLDICTQQRQS-- 1033

  Fly  1106 MIGQGDPEGDEATGGAGLGMGAHSRRNVSQALVPMRVPGMEVALPPDLSVVAETGVVIRQDSNED 1170
                                      |.....:...:|.:|:|   .|.::.     |.|.:.::
plant  1034 --------------------------NSQDCCLENSIPILELA---GLEIIG-----IAQGTEKE 1064

  Fly  1171 DLLR-----------EGNHAMDMSPPAALDFHFPLQQITLPESGMEVAIRRDLLLAETNNMGAIA 1224
            .||.           :|.|            .||                               
plant  1065 SLLSLLVSLMKTRMGDGRH------------QFP------------------------------- 1086

  Fly  1225 GGAGGGANASATPPAGASNEMFSPTTPTGSGMLLPFQRVQPVAVPSSGNMDIVPSNAMGAGGSFT 1289
              ..|..|.|:.  .|...:.||........:|   |.:.|..|..||               |.
plant  1087 --EPGSCNISSW--IGNLLKKFSAIDSVCMNLL---QSLAPEVVGQSG---------------FD 1129

  Fly  1290 SGVSGSGTGRRMNYETGGARKRSVDIAIGGSNKDELHLDESILSLLLKLHSQLSGTLDSFSLS-D 1353
            ..:|||.:..:...:   |::|..                   :::.|:.::.|..|.:.|.| |
plant  1130 KVMSGSTSDEKRKAK---AKERQA-------------------AIMAKMKAEQSKFLSTLSSSMD 1172

  Fly  1354 GEDQSSD---DDSTMDVD-----------CNEASTS--------MAAAESTALAERG-----RSK 1391
            .:|..|:   .||.|:.|           |::..:.        :..::..:..:||     :..
plant  1173 DDDPRSEFETSDSVMEHDSEIAVREVCSLCHDPDSKDPVSFLIFLQKSKLLSFVDRGPPSWDQCP 1237

  Fly  1392 RNYKNIHVSSSRIGDGPFFIGNLLRKIAKQD-----------------EQCAQSIDDIRARLWPN 1439
            ::.|.|.|      ||   ..:|||..|..|                 .:.|..|:.|:|||..|
plant  1238 QSEKKISV------DG---APDLLRMNASSDSLRISSPLMLQLSDDTISESANMIESIKARLIGN 1293

  Fly  1440 QREKQAEAKAREAKEKEERRKKARERQQKMMQDFANK-QKLFMQSAAASSSGMGYGPEDEDDEEL 1503
               .|.|.::.:.:.|:|...::.|  ..|.|...|| :.:..||...                 
plant  1294 ---GQTEKRSSDGRGKDESNMESLE--IAMYQTVRNKIENMINQSLTR----------------- 1336

  Fly  1504 YEEQPREKEYDCIICNCTTPSTESNPIGLVVLVESSGIVGHRRRIAERLPLPINAEDESRLAHTT 1568
            .:.||.|.|      ||    :|.|.:|     ..|.:.|       |.|     :..||     
plant  1337 VDHQPHEAE------NC----SEKNSVG-----GPSTLQG-------RFP-----DIRSR----- 1369

  Fly  1569 RLAAEFNRRTELLSLKFGDESWYLSNNMAYD-NGVHVQSCGHHVHLSCLEAYLKTL-YTTQRQPV 1631
                :.:||.:.     |.:.::     ..| :||::.||||.||.||||.|||:| ..:.|:.|
plant  1370 ----QTSRRPDA-----GSDGFH-----PIDCDGVYLSSCGHAVHQSCLERYLKSLKERSGRRTV 1420

  Fly  1632 QD--------RGEFYCPVCRQLSNSVLP-------------------------LSPQL------- 1656
            .:        :.||.|||||:|:|||||                         |.|.|       
plant  1421 FEGAHIVDLKKKEFLCPVCRRLANSVLPECPGDLCSVSKLQDSPRTKLRRKDALQPSLWLSEALC 1485

  Fly  1657 ------------DRPTHLVRSGNQPFERLVADLTDLIK----------ENETI------PQPTKL 1693
                        ||...:...|:.|..:   ||..:.|          |::|:      ||...:
plant  1486 LLRSAAEVIEDGDRGKTVTPQGDGPRRK---DLKSVSKMLWDFYFPKPEDKTLKRLWLPPQSIVM 1547

  Fly  1694 TEAMGH---AMEVMTNIAQ-------------RKVKCSSITFRKLFIFVTSIARTNLEAEIIQR- 1741
            .:.:.:   :||:.|..|:             .::|.|..|...:.:.|...:||.....:.|| 
plant  1548 WDTLKYSLISMEIGTRFAKNSMLPVYCIDSLYEELKTSKGTILSVLLRVVQSSRTKNTIHVRQRF 1612

  Fly  1742 ------GGSLCTANATRYKPKRECIVPLLHVLSVHVRVLVEWPLWSSWASLAGLPVT-------- 1792
                  ..|:|...::                             ||.:|:.|...|        
plant  1613 VGMKHLAESICYGVSS-----------------------------SSSSSIFGSEGTTGSLKNID 1648

  Fly  1793 -----ATEPLPAHCLELIPSILADPIALLLKFILLAPLQLDQDYFTC------MVKVMYNLLYYQ 1846
                 |::|:.||          ||.:.|:..:...|.    .:.||      :|.:.:::...|
plant  1649 LLWNRASDPVLAH----------DPFSSLMWALFCLPF----PFLTCEESLLSLVHIFHSVSLVQ 1699

  Fly  1847 IVVQLCVTLTDLECDHIVKVYGSTSVGSDNSAAESQQQESAAGTTNNRRRAGQQQQSSSQLGKAM 1911
            .|:..|.      |                                   |..:            
plant  1700 TVIAYCA------C-----------------------------------RPSE------------ 1711

  Fly  1912 ALVLSQTNDLVHLRRDCIPSTSSSAAASAAGSSSTTSTNHGASAATASSATTIEVNLKSMELQLQ 1976
               ||:.|...:|..|.     |:|...:.|.....|.|...|.           ::|.   .::
plant  1712 ---LSELNFGENLLNDI-----SNALRESGGWEYFRSNNMDLSC-----------DIKD---TIR 1754

  Fly  1977 ALCLPFLRVAALLRQHLYR-----HEMPEI----SAPGLEFVRLVYYLELVTDSMDWDCFNASKG 2032
            ...|||||..|||.:.|..     ||..::    |.|             .||:||         
plant  1755 KYSLPFLRRCALLWKLLKSTPRKLHEESDMFDLPSDP-------------TTDNMD--------- 1797

  Fly  2033 LCFIPGTETTLPQFWCQQLMEVRPPADTV-RELVLINQHSLWQQP-------------------- 2076
              ||...::.|......:.|...||.|.: .:.:|.:...:|.|.                    
plant  1798 --FIYSPQSELNHVQELEKMFNIPPIDIILNDELLRSSTQIWLQHFQREYRVNRVKRSLCITPVV 1860

  Fly  2077 --RLLELPREYERLFTYYHERPCLNCYKVPKESSICLLCGTIVC--LKQNCCAENDCCEAVRHTL 2137
              :|::||..|:.|.....::.|:||.||.:|..:|||||:: |  :...||.|:.|   ..|.:
plant  1861 PFQLMKLPNLYQDLLQRCIKKRCVNCTKVIEEPVLCLLCGSL-CSPIWSPCCRESGC---PNHAI 1921

  Fly  2138 SCGGGIGIFLVVTSTYIIVIRGRRACLWGSLYLDDFDEEDRDLKRGKPLYLSKDRFNLL 2196
            :||.|.|:||::..|.|::.|..|...|.|.|||.|.|||.|:.|||.|||:::|:..|
plant  1922 TCGAGTGVFLLIRRTTILLQRFARQSPWPSPYLDTFGEEDIDMIRGKRLYLNEERYAAL 1980

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubr3NP_001259317.1 zf-UBR 224..291 CDD:280386 32/66 (48%)
FliJ <1410..1477 CDD:280262 21/84 (25%)
PRT6NP_001318457.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 309 1.000 Domainoid score I314
eggNOG 1 0.900 - - E1_KOG1139
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 371 1.000 Inparanoid score I565
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D81415at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21497
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
66.020

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