DRSC/TRiP Functional Genomics Resources

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Protein Alignment mahe and Tdrd12

DIOPT Version :9

Sequence 1:NP_001284994.1 Gene:mahe / 31707 FlyBaseID:FBgn0029979 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_001355316.1 Gene:Tdrd12 / 71981 MGIID:1919231 Length:1277 Species:Mus musculus


Alignment Length:419 Identity:95/419 - (22%)
Similarity:180/419 - (42%) Gaps:45/419 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 PVVSFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIVHI 299
            |.::.|:|.|.|.:.:.::|..|..|:...|..||....|.|:|.|:..|: ..|.|:.|.:..:
Mouse   383 PCLTLEKSPLSADLKKALQRNKFPGPSHTASYSWPPIARGCDMVVISHCGN-DPLLYLPPLLTIL 446

  Fly   300 ---GNQPPIIRGEGPIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSKVPQARD--L 359
               |....:....||:|:::.|..:.||.|..::.||....:|  .|..:........:|::  |
Mouse   447 QMGGCYKSLPSRNGPLAVIVCPGWKKAQFIFELLGDYSMSSRP--LHPVLLTIGLHKDEAKNMKL 509

  Fly   360 DRGVEVIIATPGRLIDFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD------- 417
            .||.:||:.||..|:..|..|:....|..:|||||. .||......|:..|::..:.:       
Mouse   510 PRGCDVIVTTPHSLLRLLTYRSLLFLRLCHLVLDEV-HMLFFEANEQMFAILDNFKKNVEVEERE 573

  Fly   418 ---RQVVMWSATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEICTEIEKPQRLVCLLN 479
               .|:|.....|.|.:..|..:|:.|...:.......:...:::|:|.:|.|.||...|:.:|:
Mouse   574 SAPHQIVAVGVHWNKHIDHLVREFMKDPCVVITALEEAALYGSVQQVVHLCLECEKTSTLLQVLD 638

  Fly   480 EISPIKNSGNNGNKIIVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVLKDFRN----G 540
            .:.      :...|.::|..:..:.|.:.:::.:.......:|.:...|.: |:|:.::.    |
Mouse   639 FVP------SQAQKTLIFTCSVAETETVCKVVESNSIFCLKMHKEMAFNLK-SILEQWKKKLSPG 696

  Fly   541 KSNILIATDVASRGLDVEDLQYVINYDYPNSSE----------NYVHRIGRTGRCQQLGTAYT-- 593
            ...:|..||.....|.:.|...|:::.:|:|.:          ::...:...|...:.|...|  
Mouse   697 SHIVLTLTDDCIPLLAITDATCVVHFSFPSSPKVLGGRLYCMSDHFQSLTEQGSPAEQGDKKTKS 761

  Fly   594 --FFTPDNAKQARELISVLEEA-GQTPSQ 619
              ..|..||..|..::..||.| .:.||:
Mouse   762 VLLLTERNASHAVGILRYLERADAKIPSE 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maheNP_001284994.1 PTZ00110 136..656 CDD:240273 95/419 (23%)
DEADc 239..446 CDD:238167 58/221 (26%)
HELICc 457..594 CDD:238034 27/154 (18%)
Tdrd12NP_001355316.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0331
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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