DRSC/TRiP Functional Genomics Resources

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Protein Alignment mahe and Ddx55

DIOPT Version :9

Sequence 1:NP_001284994.1 Gene:mahe / 31707 FlyBaseID:FBgn0029979 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_080685.2 Gene:Ddx55 / 67848 MGIID:1915098 Length:600 Species:Mus musculus


Alignment Length:409 Identity:131/409 - (32%)
Similarity:201/409 - (49%) Gaps:71/409 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 SFEESSLPAH--VIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIG 300
            ::|...:|.|  |:..::..||...|.:||...|:.:..:|:...|.||||||||:::| |:.| 
Mouse     8 AWESLQVPLHPRVLGALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIP-ILEI- 70

  Fly   301 NQPPIIRGEGPI------ALVLAPTRELAQQIQSVVRDYGHLCK--PEIRHTCIFGGSSKVPQAR 357
                ::|.|..:      |:|:.||||||.||..|:   .|..|  |:.......||.:   ...
Mouse    71 ----LLRREEKLKKNQVGAIVITPTRELAIQIDEVL---SHFTKHFPQFSQILWIGGRN---PGE 125

  Fly   358 DLDR----GVEVIIATPGRLIDFLENR--NTNLQRCT----YLVLDEADRMLDMGFEPQIRKIIE 412
            |::|    |..:|:||||||.|....:  ..:|..|.    .||||||||:||||||..|..|:|
Mouse   126 DVERFKQHGGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILE 190

  Fly   413 QIRPDRQVVMWSATWPKEVQALAGDFLNDYIQINIGSMNLSA-----------NHNIRQIVEICT 466
            .:...|:..::|||..:||:.|....|.:.::|::....::|           ||.:     ||.
Mouse   191 FLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPSRLENHYM-----ICK 250

  Fly   467 EIEKPQRLVCLLNEISPIKNSGNNGNKIIVFVETKIKVEDILQIIRA--EGYNATSIHGDKTQNE 529
            ..||..:||..|.        .....|.:||..|...||...:.:.|  :......||| |.:.:
Mouse   251 ADEKFNQLVHFLR--------SRQQEKHLVFFSTCACVEYYGKALEALLKKVKILCIHG-KMKYK 306

  Fly   530 RDSVLKDFRNGKSNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTF 594
            |:.:..:||..:|.||:.|||.:||:|:.::.:|:.||.|:::..:|||.|||.|....|:|..|
Mouse   307 RNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVF 371

  Fly   595 FTPDNAKQARELISVLEEA 613
            ..|            :|||
Mouse   372 LLP------------MEEA 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maheNP_001284994.1 PTZ00110 136..656 CDD:240273 131/409 (32%)
DEADc 239..446 CDD:238167 79/226 (35%)
HELICc 457..594 CDD:238034 43/138 (31%)
Ddx55NP_080685.2 DEADc 9..224 CDD:238167 79/226 (35%)
Q motif 9..37 7/27 (26%)
DEXDc 24..228 CDD:214692 76/215 (35%)
DEAD box 171..174 2/2 (100%)
Helicase_C 252..363 CDD:278689 39/119 (33%)
DUF4217 403..462 CDD:290667
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 499..551
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0331
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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