DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mahe and ddx17

DIOPT Version :9

Sequence 1:NP_001284994.1 Gene:mahe / 31707 FlyBaseID:FBgn0029979 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_001016781.1 Gene:ddx17 / 549535 XenbaseID:XB-GENE-1000758 Length:609 Species:Xenopus tropicalis


Alignment Length:640 Identity:319/640 - (49%)
Similarity:397/640 - (62%) Gaps:80/640 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 KAKNPGRNLVKPKWE--NLEPFLKDFYNIHPNTLAKSEQQVAEIRRELEITVSGNELPHPVVSFE 240
            |..|||..|.|.:|:  .|..|.|:||..||.....::..|.|:||:.|||:.|...|.|:..|.
 Frog    21 KFGNPGERLRKKRWDLSELPKFEKNFYTEHPEVARMTQHDVEELRRKKEITIRGVNCPKPIYGFH 85

  Fly   241 ESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQPPI 305
            :::.|.:|::.:..|.|.:||.||.||:|:||||||:||||||||||||||:|||:|||.:||.:
 Frog    86 QANFPQYVLDVLIDQRFKEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAMVHINHQPYL 150

  Fly   306 IRGEGPIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSKVPQARDLDRGVEVIIATP 370
            .||:|||.||||||||||||:|.|..|||.  ...::.|||:||:.|.||.|||:||||:.||||
 Frog   151 ERGDGPICLVLAPTRELAQQVQQVADDYGK--SSRLKSTCIYGGAPKGPQIRDLERGVEICIATP 213

  Fly   371 GRLIDFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVVMWSATWPKEVQALA 435
            ||||||||...|||:|||||||||||||||||||||||||::|||||||.:||||||||||:.||
 Frog   214 GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLA 278

  Fly   436 GDFLNDYIQINIGSMNLSANHNIRQIVEICTEIEKPQRLVCLLNEISPIKNSGNNGNKIIVFVET 500
            .|||.||:|||||::.|||||||.|||::|.|.||..:|:.|:.||...|.     ||.|:||||
 Frog   279 EDFLRDYVQINIGNLELSANHNILQIVDVCQESEKDHKLIQLMEEIMAEKE-----NKTIIFVET 338

  Fly   501 KIKVEDILQIIRAEGYNATSIHGDKTQNERDSVLKDFRNGKSNILIATDVASRGLDVEDLQYVIN 565
            |.:.:|:.:.:|.:|:.|..|||||:|.|||.||.:||.||:.||||||||||||||||:::|||
 Frog   339 KRRCDDLTRRMRRDGWPAMCIHGDKSQQERDWVLCEFRTGKAPILIATDVASRGLDVEDIKFVIN 403

  Fly   566 YDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPDNAKQARELISVLEEAGQTPSQALLDLARSMPS 630
            ||||||||:||||||||.|....|||||||||.|.||||||:.|||||.||.:..|:.|. ....
 Frog   404 YDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELVKVLEEANQTINPKLMQLV-DHGR 467

  Fly   631 SGGYRGNKRW-----NNNSGGDRNTGGNNGIYQQRNNNPLNYQAG---NNYNNNRSGP----PTG 683
            .||..|..|:     |||.         |.:||:..|..::.:.|   :..||||.|.    |||
 Frog   468 GGGGGGRSRYRSIPTNNNP---------NMMYQEECNRRMHGKDGGRRDGRNNNRDGAISNNPTG 523

  Fly   684 SSYQQ--YAAGGNTYLQNGAGGGVNWNRMNQMGQDGGAGQQQRNGNTYRPRAPFNNGGPRAIMGH 746
            ....:  |:.||..                                        :|..|......
 Frog   524 RDQNRPNYSYGGQV----------------------------------------SNFQPNQYSYG 548

  Fly   747 QGGGVGAG---GAAGVGGGPQQLMAPQQGGQYMPQAYRGRSQFVPQGAGAGGMPP 798
            |||..|..   |.|.....||.||:.    |:.|.:..|...::.|.|.....||
 Frog   549 QGGFTGVANNYGTAAYAQAPQPLMSQ----QFAPPSSSGLLNYMNQAASYQYPPP 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maheNP_001284994.1 PTZ00110 136..656 CDD:240273 285/484 (59%)
DEADc 239..446 CDD:238167 142/206 (69%)
HELICc 457..594 CDD:238034 81/136 (60%)
ddx17NP_001016781.1 PTZ00110 11..462 CDD:240273 276/447 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000439
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X504
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

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