DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mahe and abs

DIOPT Version :9

Sequence 1:NP_001284994.1 Gene:mahe / 31707 FlyBaseID:FBgn0029979 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_524220.1 Gene:abs / 40530 FlyBaseID:FBgn0015331 Length:619 Species:Drosophila melanogaster


Alignment Length:436 Identity:171/436 - (39%)
Similarity:241/436 - (55%) Gaps:31/436 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 SEQQVAEIRRELEITVSGNELPHPVVSFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRD 276
            ||::...:|.||.|.|.|.....|:.||.|...|..::..:..:|...||.||.||.|..|:|||
  Fly   152 SEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRD 216

  Fly   277 LVGIAQTGSGKTLAYMLPAIVHIGNQP---PIIRGEGPIALVLAPTRELAQQIQSVVRDYG-HL- 336
            |:|||.|||||||.::||.|:....|.   |..|.|||..|::.|:||||:|...:::.|. || 
  Fly   217 LIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQ 281

  Fly   337 -C-KPEIRHTCIFGGSSKVPQARD-LDRGVEVIIATPGRLIDFLENRNTNLQRCTYLVLDEADRM 398
             | .|||| :|:..|...|.:|.| :.|||.:::||||||:|.|:.:...|..|.||.:||||||
  Fly   282 ACGMPEIR-SCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRM 345

  Fly   399 LDMGFEPQIRKIIEQIRPDRQVVMWSATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVE 463
            :|||||..:|.|....:..||.:::|||.||::|..|...|...:.||:|... :|:.|:.|.||
  Fly   346 IDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAG-AASMNVTQQVE 409

  Fly   464 ICTEIEKPQRLVCLLNEISPIKNSGNNGNKIIVFVETKIKVEDILQIIRAEGYNATSIHGDKTQN 528
            ...:..|...|:..|.:.:|         .:::|.|.|..|:.|.:.:..:|..|.:|||.|.|.
  Fly   410 YVKQEAKVVYLLDCLQKTAP---------PVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQE 465

  Fly   529 ERDSVLKDFRNGKSNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYT 593
            ||...:..:|.||.::|:||||||:|||..::|:|||||.|:..||||||||||||....|.|.|
  Fly   466 ERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATT 530

  Fly   594 FFTPDNAKQA------------RELISVLEEAGQTPSQALLDLARS 627
            .......:..            :|:...|:|.........|||..|
  Fly   531 LINKTTEQSVLLDLKHLLIEGKQEVPDFLDELAPETEHQHLDLGDS 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maheNP_001284994.1 PTZ00110 136..656 CDD:240273 171/436 (39%)
DEADc 239..446 CDD:238167 93/214 (43%)
HELICc 457..594 CDD:238034 56/136 (41%)
absNP_524220.1 DEADc 179..393 CDD:238167 93/214 (43%)
DEXDc 192..397 CDD:214692 93/205 (45%)
Helicase_C 414..523 CDD:278689 50/117 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451749
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D183201at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

Return to query results.
Submit another query.