DRSC/TRiP Functional Genomics Resources

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Protein Alignment mahe and Ddx1

DIOPT Version :9

Sequence 1:NP_001284994.1 Gene:mahe / 31707 FlyBaseID:FBgn0029979 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_524212.2 Gene:Ddx1 / 40457 FlyBaseID:FBgn0015075 Length:727 Species:Drosophila melanogaster


Alignment Length:728 Identity:164/728 - (22%)
Similarity:257/728 - (35%) Gaps:233/728 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 GGAGINGAATAAGSM-HFGQPYGVMTYGIQNGLGMGAAGSGGG-----NPYRQQ-----NGVAFA 108
            ||..:..|.|.:|.. .|..|...:.:.....|..|.||.||.     .|:...     |.:|..
  Fly    39 GGDVLMAAETGSGKTGAFCLPILQIVWETLRDLEEGKAGKGGAIGGAVTPWTMSFFDRGNALAVT 103

  Fly   109 GNGL-----------GGGAGGGSGGSG----------------GYGGQRGKNPTYAQRYQKPNNG 146
            .:||           |..|..|..|.|                |:..|:........|.     |
  Fly   104 PDGLRCQSREFKEWHGCRATTGVRGKGKFYFEATVTDEGLCRVGWSTQQANLDLGTCRM-----G 163

  Fly   147 AGVAG-GYQSNN-----YNAA-----ALGMLSKEERAEIQREKAKNPGRNLVKPKWENLEPFLKD 200
            .|..| |.:|||     |..|     .:|.|...:..|:.                     |.|:
  Fly   164 FGFGGTGKKSNNRQFDDYGEAFGKADVIGCLLDLKNQEVS---------------------FTKN 207

  Fly   201 FYNIH-----PNTLAKSEQQVAEIRRELEITVSGNELPHPVVSFEESSLPAHVIEEMKRQ-GFTK 259
            ..|:.     |:.|||                             |:..||.|::..:.| .|.|
  Fly   208 GQNLGVAFRLPDNLAK-----------------------------ETFYPAVVLKNAEMQFNFGK 243

  Fly   260 PTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYML--PAIVHIGNQPPIIRGEGPIALVLAPTREL 322
            .....:       .|...||..|.|...:.|..:  ||......:|   ....|.|:::.|:|||
  Fly   244 TDFKYA-------PGNGFVGACQAGPEHSKANPITGPAAGAPSAKP---APNAPQAIIMEPSREL 298

  Fly   323 AQQIQSVVRDYG-HLCKPEIRHTCIFGGSSKVPQARDLDRGVEVIIATPGRLIDFLENRNTNLQR 386
            |:|..:.:..:. ||..||:|...:.||.....|...|.:|..:::.|||||.:.:.:....|..
  Fly   299 AEQTYNQIEKFKYHLSNPEVRSLLLIGGVRLEEQKAQLMQGTHIVVGTPGRLEEMINSGLVLLTH 363

  Fly   387 CTYLVLDEADRMLDMGFE---PQIRKIIEQIRPD---RQVVMWSA-------------------- 425
            |.:.||||||.:|..|:.   .::.|.|.:|..|   .|:|:.||                    
  Fly   364 CRFFVLDEADALLKQGYTELIDRLHKQIPKITSDGRRLQMVVCSATLHAFEVKKMAERLMHFPTW 428

  Fly   426 --------------------------TWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEI 464
                                      ||....|.:..|.::|...::.|      ||: ::.:..
  Fly   429 VDLKGEDAVPETVHHVVCLVDPQMDTTWQSLRQPIGTDGVHDRDNVHPG------NHS-KETLSQ 486

  Fly   465 CTEIEKPQRLVCLLNEISPIKNSGNNGNKIIVFVETKIKVEDILQIIRAEG---YNATSIHGDKT 526
            ..::.|.:..|..:::        :|.::.|:|..||...:::.:.:|..|   |:...:|||:.
  Fly   487 AVKLLKGEYCVHAIDK--------HNMDRAIIFCRTKQDCDNLERFLRQRGGKHYSCVCLHGDRK 543

  Fly   527 QNERDSVLKDFRNGKSNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTA 591
            ..||...|:.|:..:...||.||||:||||:..|.::||...|:...||||||||.||.:::|.|
  Fly   544 PQERKENLEMFKRQQVKFLICTDVAARGLDITGLPFMINVTLPDDKTNYVHRIGRVGRAERMGLA 608

  Fly   592 YTFFTPDNAKQARELISVLEEAGQTPSQALLDLARSMPSSGGYRGNKRWNNNSGGDRNTGGNNGI 656
                                          :.|..::|....|.|  .|..:.|...|   |..:
  Fly   609 ------------------------------ISLVATVPEKVWYHG--EWCKSRGRSCN---NTNL 638

  Fly   657 YQQRN-----NNP 664
            .:.|.     |.|
  Fly   639 TEVRGCCIWYNEP 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maheNP_001284994.1 PTZ00110 136..656 CDD:240273 136/594 (23%)
DEADc 239..446 CDD:238167 62/262 (24%)
HELICc 457..594 CDD:238034 43/139 (31%)
Ddx1NP_524212.2 P-loop_NTPase 4..>62 CDD:304359 7/22 (32%)
SPRY_DDX1 91..242 CDD:293933 36/205 (18%)
SrmB 279..>612 CDD:223587 93/380 (24%)
P-loop_NTPase <280..426 CDD:304359 42/148 (28%)
Helicase_C 492..602 CDD:278689 40/117 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451755
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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