DRSC/TRiP Functional Genomics Resources

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Protein Alignment mahe and vas

DIOPT Version :9

Sequence 1:NP_001284994.1 Gene:mahe / 31707 FlyBaseID:FBgn0029979 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_001260458.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster


Alignment Length:672 Identity:221/672 - (32%)
Similarity:336/672 - (50%) Gaps:88/672 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GNGAAAGAGGSGNGAPRHERQYYPRGNFGGAAGG--AGINGAATAAGSMHFGQPYGVMTYGIQNG 85
            |:| ..|:||.|.|.....|..:  |..||..||  .|..|.....|..|.|:..|...:     
  Fly    37 GDG-VGGSGGEGGGYQGGNRDVF--GRIGGGRGGGAGGYRGGNRDGGGFHGGRREGERDF----- 93

  Fly    86 LGMGAAGSGGGNPYRQQNGVAFAGNGLGGGAGGGSGGSGGYGGQRGKNPTYAQRYQKPNNGAGVA 150
                ..|.||           |.| |.||..||..|..||.||.||....:..|..:..:|....
  Fly    94 ----RGGEGG-----------FRG-GQGGSRGGQGGSRGGQGGFRGGEGGFRGRLYENEDGDERR 142

  Fly   151 GGYQSNNYNAAALGMLSKEERAEIQREKAK-------------NPGRNLVKPKWENLEPFLKDFY 202
            |............|.|.:|||...:.|:..             |...|:|    |::|. .::||
  Fly   143 GRLDREERGGERRGRLDREERGGERGERGDGGFARRRRNEDDINNNNNIV----EDVER-KREFY 202

  Fly   203 NIHPNTLAKSEQQVAEI-------------RRELEITVSGNELPHPVVSFEESSLPAHVIEEMKR 254
             |.|    :......||             ...:.:.|:|:::|.|:..|..:.|...:|:.:.:
  Fly   203 -IPP----EPSNDAIEIFSSGIASGIHFSKYNNIPVKVTGSDVPQPIQHFTSADLRDIIIDNVNK 262

  Fly   255 QGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQPPIIRGEGPIALVLAPT 319
            .|:..||.||....|:..|||||:..||||||||.|::||.:..:...|..:....|..::::||
  Fly   263 SGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPT 327

  Fly   320 RELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSKVPQARDLDRGVEVIIATPGRLIDFLENRNTNL 384
            ||||.||.:..|.:..  :..::...::||:|...|...:.||..|:|||||||:||::......
  Fly   328 RELAIQIFNEARKFAF--ESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGRLLDFVDRTFITF 390

  Fly   385 QRCTYLVLDEADRMLDMGFEPQIRKIIEQI--RPDRQVVMWSATWPKEVQALAGDFLNDYIQINI 447
            :...::|||||||||||||...:|:|:..:  ||:.|.:|:|||:|:|:|.:||:||.:|:.:.|
  Fly   391 EDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYVFVAI 455

  Fly   448 GSMNLSANHNIRQIVEICTEIEKPQRLVCLLNEISPIKNSGNNGNKIIVFVETKIKVEDILQIIR 512
            |.:. .|..:::|.:....:..|..:|:.:|:|         ..:..|||||||...:.:...:.
  Fly   456 GIVG-GACSDVKQTIYEVNKYAKRSKLIEILSE---------QADGTIVFVETKRGADFLASFLS 510

  Fly   513 AEGYNATSIHGDKTQNERDSVLKDFRNGKSNILIATDVASRGLDVEDLQYVINYDYPNSSENYVH 577
            .:.:..||||||:.|::|:..|:||:||...:||||.|||||||::::::|||||.|:..::|||
  Fly   511 EKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASRGLDIKNIKHVINYDMPSKIDDYVH 575

  Fly   578 RIGRTGRCQQLGTAYTFFTPDNAKQ-ARELISVLEEAGQTPSQALLDLARSMPS--SGGYRGNKR 639
            |||||||....|.|.:||.|:..:. |.:|:.:||.:|||    :.|..|:..:  .|||.    
  Fly   576 RIGRTGRVGNNGRATSFFDPEKDRAIAADLVKILEGSGQT----VPDFLRTCGAGGDGGYS---- 632

  Fly   640 WNNNSGGDRNTGGNNGIYQQRN 661
             |.|.||....|..|.:....|
  Fly   633 -NQNFGGVDVRGRGNYVGDATN 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maheNP_001284994.1 PTZ00110 136..656 CDD:240273 184/550 (33%)
DEADc 239..446 CDD:238167 82/208 (39%)
HELICc 457..594 CDD:238034 54/136 (40%)
vasNP_001260458.1 DEADc 247..454 CDD:238167 82/208 (39%)
DEXDc 260..467 CDD:214692 82/209 (39%)
Helicase_C 475..584 CDD:278689 51/117 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451603
Domainoid 1 1.000 102 1.000 Domainoid score I343
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9750
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.940

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