DRSC/TRiP Functional Genomics Resources

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Protein Alignment mahe and ddx-17

DIOPT Version :9

Sequence 1:NP_001284994.1 Gene:mahe / 31707 FlyBaseID:FBgn0029979 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_001041134.1 Gene:ddx-17 / 179897 WormBaseID:WBGene00010260 Length:561 Species:Caenorhabditis elegans


Alignment Length:672 Identity:309/672 - (45%)
Similarity:395/672 - (58%) Gaps:118/672 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 ERQYYPRGNFGGAAGGAGINGAATAAGSMHFGQPYGVMTYGIQNGLGMGAAGSGGGNPYRQQNGV 105
            :|.|....::||::||                        |.:.|.|.|..|.|||.   ...| 
 Worm     3 DRGYGGSRSYGGSSGG------------------------GSRGGYGGGGRGGGGGG---YSGG- 39

  Fly   106 AFAGNGLGGGAGGGSGGSGGYGGQRGKNPTYAQRYQKPNNGAGVAGGYQSNNYNAAALGMLSKEE 170
              .|.|.|||.|||.|| ||||                  |.|..||...:|.:|          
 Worm    40 --RGGGYGGGGGGGYGG-GGYG------------------GGGRGGGRGGSNGSA---------- 73

  Fly   171 RAEIQREKAKNPGRNLVKPKW--ENLEPFLKDFYNIHPNTLAKSEQQVAEIRREL---EITVSGN 230
                        |..|....|  |||.|..||||  |.|. |.|.::..||.:.:   ::|:.|.
 Worm    74 ------------GGRLRDVDWSAENLTPIEKDFY--HENA-AVSRREQYEIDQWVSANQVTLEGR 123

  Fly   231 ELPHPVVSFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLPA 295
            .:|.||..|.|:.||.. |.|:....|.|||.|||..||||:||||::.||:||||||||:||||
 Worm   124 GVPRPVFEFNEAPLPGQ-IHELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPA 187

  Fly   296 IVHIGNQPPIIRGEGPIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSKVPQARDLD 360
            :|||..|....|||||..|||.||||||||:|.|..|:.|  ...::.||:|||:||.||||||:
 Worm   188 LVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCH--SLGLKMTCLFGGASKGPQARDLE 250

  Fly   361 RGVEVIIATPGRLIDFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVVMWSA 425
            |||::::||||||:|||:|..||:::|:|||||||||||||||||||:|||.|||||||.:|:||
 Worm   251 RGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSA 315

  Fly   426 TWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEICTEIEKPQRLVCLLNEISPIKNSGNN 490
            ||||||:|||.||..|...:|:||:.|:|||||.|:|:|..|..|..:|:.|||.|...|..   
 Worm   316 TWPKEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAKLMELLNHIMNQKEC--- 377

  Fly   491 GNKIIVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVLKDFRNGKSNILIATDVASRGL 555
              |.|:|||||.|.:::.:.:|.:|:....|||||.|.|||.||::|:.||:.|::|||||:|||
 Worm   378 --KTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGL 440

  Fly   556 DVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPDNAKQARELISVLEEAGQTPSQA 620
            ||:|:::||||||||:||:||||||||||..:.||||||||..||.:|::|:.||:||.||..||
 Worm   441 DVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTVPQA 505

  Fly   621 LLDLARSMPSSGGYRGNKRWNNNSGGDRNTGGNNGIYQQRNNNPLNYQAGNNYNNNRSGPPTGSS 685
            |.|:|..  |.||        :||.|....||    :|:|           .|..|.:..|....
 Worm   506 LRDMANR--SYGG--------SNSRGRYGGGG----FQKR-----------GYGGNDNFAPKRPR 545

  Fly   686 YQQYAAGGNTYLQNGAGGGVNW 707
            |.....||      |:|||..|
 Worm   546 YDNGGYGG------GSGGGGRW 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maheNP_001284994.1 PTZ00110 136..656 CDD:240273 267/524 (51%)
DEADc 239..446 CDD:238167 132/206 (64%)
HELICc 457..594 CDD:238034 73/136 (54%)
ddx-17NP_001041134.1 DEADc 132..336 CDD:238167 132/206 (64%)
DEXDc 148..351 CDD:214692 135/204 (66%)
HELICc 347..479 CDD:238034 73/136 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 255 1.000 Domainoid score I1101
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S387
OMA 1 1.010 - - QHG53695
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000439
OrthoInspector 1 1.000 - - otm14584
orthoMCL 1 0.900 - - OOG6_100364
Panther 1 1.100 - - O PTHR47958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X504
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.870

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