DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mahe and ddx-46

DIOPT Version :9

Sequence 1:NP_001284994.1 Gene:mahe / 31707 FlyBaseID:FBgn0029979 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_001033411.1 Gene:ddx-46 / 176943 WormBaseID:WBGene00018776 Length:970 Species:Caenorhabditis elegans


Alignment Length:574 Identity:206/574 - (35%)
Similarity:315/574 - (54%) Gaps:74/574 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 MLSKEERAEIQREKAKNPGRNLVKPKWENLEPFLKDFYNIHPNTLAKSEQQVAEIRRELE-ITVS 228
            ||::.:.:::...|                  |.|:||.........::.:|...|.||: |||.
 Worm   249 MLAQTDHSKVYYRK------------------FKKNFYIETEEIRRMTKAEVKAYREELDSITVK 295

  Fly   229 GNELPHPVVSFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYML 293
            |.:.|.|:.::.:..:...::..:|:..::|||:||:|..|..:||||::|||:||||||||::|
 Worm   296 GIDCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLL 360

  Fly   294 PAIVHIGNQPPIIRGEGPIALVLAPTRELAQQIQSVVRDYGHLCKP-EIRHTCIFGGSSKVPQAR 357
            |...||.:||.:..|:||||::||||||||.|   ..::.....|| .::..|.:||.....|..
 Worm   361 PMFRHILDQPELEEGDGPIAVILAPTRELAMQ---TYKEANKFAKPLGLKVACTYGGVGISEQIA 422

  Fly   358 DLDRGVEVIIATPGRLIDFL---ENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 419
            ||.||.|:::.||||:||.|   ..:.|||:|.|||||||||||.|.||||||.|::..||||:|
 Worm   423 DLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQ 487

  Fly   420 VVMWSATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEICTEIEKPQRLVCLLNEISPI 484
            .|::|||:|:.::|||...|:..::|.:|..::..: :|.|...||.|   .|:.:.||..:...
 Worm   488 TVLFSATFPRHMEALARKVLDKPVEILVGGKSVVCS-DITQNAVICAE---HQKFLKLLELLGMY 548

  Fly   485 KNSGNNGNKIIVFVETKIKVEDILQIIRAEGYNATS-IHGDKTQNERDSVLKDFRNGKSNILIAT 548
            ...|::    ||||:.:.|.:||:..:...|||:.: :||...|::|||.:.||:.|...:|:||
 Worm   549 YEEGSS----IVFVDKQEKADDIVDQLMRTGYNSVAPLHGGIDQHDRDSSIADFKTGVIKVLVAT 609

  Fly   549 DVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPDN-AKQARELISVLEE 612
            .||:|||||::|..|:|||.||..|:||||:|||||..:.|.||||..|:: .|.|.|:....|.
 Worm   610 SVAARGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRAGRKGYAYTFVLPEHQEKMAGEICRAFET 674

  Fly   613 AGQTPS---QALLDLARS-MPSSG--------GYRGN--KRWNNNSGGDRN------------TG 651
            ||..|.   :|:.:..:| |.:.|        |:.|:  |.....:..|.|            .|
 Worm   675 AGCKPPADLKAMFERFKSEMAAEGKEVKLGGKGFEGSGYKYDEGEAEADANKKRMTRLVHGMEAG 739

  Fly   652 GNNGIYQQRNNNPLNYQAGNNYNNNR---SGPPTGSSYQQYAAGGNTYLQNGAG 702
            |:       :::.|..|..:.....|   .|.|  .|.:..::.||......||
 Worm   740 GD-------DDDDLEEQLSSMIKTKRRVVHGKP--QSEKPSSSSGNAKNDREAG 784

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maheNP_001284994.1 PTZ00110 136..656 CDD:240273 196/523 (37%)
DEADc 239..446 CDD:238167 98/210 (47%)
HELICc 457..594 CDD:238034 58/137 (42%)
ddx-46NP_001033411.1 SrmB 276..793 CDD:223587 199/529 (38%)
DEADc 316..514 CDD:238167 98/200 (49%)
HELICc 534..655 CDD:238034 54/127 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D245118at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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