DRSC/TRiP Functional Genomics Resources

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Protein Alignment mahe and ddx-23

DIOPT Version :9

Sequence 1:NP_001284994.1 Gene:mahe / 31707 FlyBaseID:FBgn0029979 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_498260.2 Gene:ddx-23 / 175818 WormBaseID:WBGene00017162 Length:730 Species:Caenorhabditis elegans


Alignment Length:561 Identity:196/561 - (34%)
Similarity:288/561 - (51%) Gaps:89/561 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 NPTYAQRYQKPNNGAGVAGGYQSNNYNAAALGMLSKEERAEIQREKAKNPGRNLVKPKWENLEPF 197
            |..|..|::....|.|...|...|         ..|:|:....:|..:|  |..|..|.:.:...
 Worm   197 NKLYQSRHEIQFFGRGSVAGTDVN---------AQKKEKNSFYQEMMEN--RRTVDEKEQEMHRL 250

  Fly   198 LKDFYNIHPNTLAKSEQQVAE--------------------IRRELEITVSGNELPHPVVSFEES 242
            .|:.         |.|::||.                    .|.:..|::.|..:|.|:.::||:
 Worm   251 EKEL---------KKEKKVAHDDRHWRMKELSEMSDRDWRIFREDFNISIKGGRVPRPLRNWEEA 306

  Fly   243 SLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQPPIIR 307
            ..|..|.:.:|..|:.:||.||.|..||.|..||::|:|:||||||.|::||.:|.|.:.|.:.|
 Worm   307 GFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMER 371

  Fly   308 GE----GPIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSKVPQARDLDRGVEVIIA 368
            .|    ||.|:::||||||||||:.....:|.|.  .|:...:.||:|:..|...|..||||:||
 Worm   372 QEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLL--GIKTVSVIGGASREDQGMKLRMGVEVVIA 434

  Fly   369 TPGRLIDFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD---------------- 417
            |||||:|.||||...|.:|||::||||||||||||||.::|::|.: ||                
 Worm   435 TPGRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEYM-PDTNMKKDTDEFDNEEAL 498

  Fly   418 ----------RQVVMWSATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEICTEIEKPQ 472
                      ||.||::||....::.||..:|.....::|||.. .....:.|:|.:..|..|.:
 Worm   499 MKGFSTREKYRQTVMFTATMSSAIERLARQYLRRPAVVHIGSAG-KPTERVEQVVYMVPEDRKRK 562

  Fly   473 RLVCLL-NEISPIKNSGNNGNKIIVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVLKD 536
            :||.:| ::..|         .||:||..|...:.:.:.:...|:..|.:||.|.|::|:..|:.
 Worm   563 KLVEVLESQFQP---------PIIIFVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYALQA 618

  Fly   537 FRNGKSNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPDNAK 601
            .:.|.|:||:|||||.||:||:|:..|:|||...|.|:|.||||||||..:.|.|.||.|||:..
 Worm   619 LKEGTSDILVATDVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIGRTGRAGKHGKAITFLTPDDTA 683

  Fly   602 QARELISVLEEAGQT---PSQALLDLARSMPSSGGYRGNKR 639
            ...:|..||.|:..:   |..|....|:|.|  |.:...||
 Worm   684 VYFDLKQVLVESPVSSCPPELANHPDAQSKP--GVFTSKKR 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maheNP_001284994.1 PTZ00110 136..656 CDD:240273 195/558 (35%)
DEADc 239..446 CDD:238167 100/236 (42%)
HELICc 457..594 CDD:238034 52/137 (38%)
ddx-23NP_498260.2 DEADc 303..533 CDD:238167 100/232 (43%)
DEXDc 316..551 CDD:214692 99/238 (42%)
HELICc 552..676 CDD:238034 51/132 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D183201at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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