DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ykt6 and SEC22

DIOPT Version :9

Sequence 1:NP_572423.1 Gene:Ykt6 / 31706 FlyBaseID:FBgn0260858 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_013370.1 Gene:SEC22 / 850973 SGDID:S000004258 Length:214 Species:Saccharomyces cerevisiae


Alignment Length:154 Identity:41/154 - (26%)
Similarity:69/154 - (44%) Gaps:8/154 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 KTIVERTQP--ALRQSVKQDAYMCHVYVRADNLAGVLIADHEYPHRVAHTLITKILDDFTAKVSA 108
            |.:|.|..|  |...:::..::..| |::...:...:|.:..||..:|.:.:..|..:|.... |
Yeast    35 KIVVSRLTPQSATEATLESGSFEIH-YLKKSMVYYFVICESGYPRNLAFSYLNDIAQEFEHSF-A 97

  Fly   109 DQWPNGTEATISFDLLPAFL----ARYQNPVEADPLTKMQNDLDETKIILKNTIEAVLERGEKLD 169
            :::|..|.....|.....||    ..|.:....|.|.::..:|...|.|:...||.:|.||:.||
Yeast    98 NEYPKPTVRPYQFVNFDNFLQMTKKSYSDKKVQDNLDQLNQELVGVKQIMSKNIEDLLYRGDSLD 162

  Fly   170 DMVSKSEKLSLQSKAFYKTAKKTN 193
            .|...|..|...||.:.|:|:|.|
Yeast   163 KMSDMSSSLKETSKRYRKSAQKIN 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ykt6NP_572423.1 SNC1 4..196 CDD:227472 41/154 (27%)
SEC22NP_013370.1 SNC1 2..192 CDD:227472 41/154 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5143
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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