DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ykt6 and ATYKT62

DIOPT Version :10

Sequence 1:NP_572423.1 Gene:Ykt6 / 31706 FlyBaseID:FBgn0260858 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_200626.1 Gene:ATYKT62 / 835930 AraportID:AT5G58180 Length:199 Species:Arabidopsis thaliana


Alignment Length:209 Identity:87/209 - (41%)
Similarity:115/209 - (55%) Gaps:25/209 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VKLFALSIFHKGASEAR---LLKTASDLQSFS--FFQRGTVNEFMTFASKTIVERTQPALRQSVK 61
            :|:.||.:. |...|.|   :|...|||..|.  .|.|....||:.|.::|:..||.|..|||||
plant     1 MKITALLVL-KCDPETREPVILANVSDLSQFGKFSFYRSNFEEFIVFIARTVARRTPPGQRQSVK 64

  Fly    62 QDAYMCHVYVRADNLAGVLIADHEYPHRVAHTLITKILDDFTA--------KVSADQWPNGTEAT 118
            .:.|..|.| ..:.|..|...|..||.|.|.:|:.::||.:..        :.|:..||...||:
plant    65 HEEYKVHAY-NINGLCAVGFMDDHYPVRSAFSLLNQVLDVYQKDYGDTWRFENSSQPWPYLKEAS 128

  Fly   119 ISFDLLPAFLARYQNPVEADPLTKMQNDLDETKIILKNTIEAVLERGEKLDDMVSKSEKLSLQSK 183
                      .::::|.|||.|.|:|.:||||||||..||:.||.||||||.:|.||.:|||.||
plant   129 ----------DKFRDPAEADKLLKIQRELDETKIILHKTIDGVLARGEKLDSLVEKSSELSLASK 183

  Fly   184 AFYKTAKKTNSCCS 197
            .|||.||||||||:
plant   184 MFYKQAKKTNSCCT 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ykt6NP_572423.1 SNC1 4..196 CDD:227472 84/204 (41%)
ATYKT62NP_200626.1 SNC1 1..196 CDD:227472 85/206 (41%)
R-SNARE_YKT6 137..197 CDD:277220 41/59 (69%)

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