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Protein Alignment Ykt6 and Sec22c
DIOPT Version :9
Sequence 1: | NP_572423.1 |
Gene: | Ykt6 / 31706 |
FlyBaseID: | FBgn0260858 |
Length: | 199 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038938688.1 |
Gene: | Sec22c / 687022 |
RGDID: | 1590146 |
Length: | 306 |
Species: | Rattus norvegicus |
Alignment Length: | 145 |
Identity: | 30/145 - (20%) |
Similarity: | 53/145 - (36%) |
Gaps: | 39/145 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 51 RTQPALRQSVKQ-----DAYMCH---VYVRADNLAGVLIADHEYPHRVAHTLITKILDDFTAKVS 107
|...||.|.:.| .|..|. .::.:.::|.:.|...:.|..:|...:..:..||.|
Rat 35 RQLKALAQRLAQHPGRGSAESCDFRIYFLSSGDVACMAICSRQCPAAMAFCFLEALWWDFIA--- 96
Fly 108 ADQWPNGTEATISFDLLPAFLARYQNPVEADPLTKMQND--LDETKIILKNTIEAVLERG-EKLD 169
|:|.....|| :.|.|.::.| :.:||....:...:.::.| ||:
Rat 97 ------------SYDTTCIGLA-------SRPYTFLEFDSVIQKTKWHFNHMSSSQMKSGLEKI- 141
Fly 170 DMVSKSEKLSLQSKA 184
.|:|..|..|
Rat 142 -----QEELKSQPPA 151
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Ykt6 | NP_572423.1 |
SNC1 |
4..196 |
CDD:227472 |
30/145 (21%) |
Sec22c | XP_038938688.1 |
Longin |
5..123 |
CDD:341428 |
21/109 (19%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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