DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ykt6 and VAMP7

DIOPT Version :9

Sequence 1:NP_572423.1 Gene:Ykt6 / 31706 FlyBaseID:FBgn0260858 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_001172112.1 Gene:VAMP7 / 6845 HGNCID:11486 Length:260 Species:Homo sapiens


Alignment Length:149 Identity:27/149 - (18%)
Similarity:53/149 - (35%) Gaps:27/149 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 FSFFQRGTV---------NEFMTFASKTIVERTQPALRQSVKQDAYMCHVYVRADNLAGVLIADH 84
            |:...|||.         ..|:....:.:.:......:.:.....|:.| |:..|.:..:.|.|.
Human     5 FAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFH-YICQDRIVYLCITDD 68

  Fly    85 EYPHRVAHTLITKILDDFTAKVSADQWPNGTEATISF---------DLLPAFLARYQNPVEADPL 140
            ::....|...:.:|...|       |...|:.|..:.         .:|.|.|..:......|.:
Human    69 DFERSRAFNFLNEIKKRF-------QTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKGLDKV 126

  Fly   141 TKMQNDLDETK-IILKNTI 158
            .:.|..:||.| |:::|.:
Human   127 METQAQVDELKGIMVRNIV 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ykt6NP_572423.1 SNC1 4..196 CDD:227472 27/149 (18%)
VAMP7NP_001172112.1 Longin 29..104 CDD:316307 12/82 (15%)
SNARE 124..>144 CDD:328933 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5143
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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