DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Ykt6 and ykt6

DIOPT Version :9

Sequence 1:	NP_572423.1	Gene:	Ykt6 / 31706	FlyBaseID:	FBgn0260858	Length:	199	Species:	Drosophila melanogaster
Sequence 2:	NP_989023.1	Gene:	ykt6 / 394619	XenbaseID:	XB-GENE-949728	Length:	198	Species:	Xenopus tropicalis

Alignment Length:	195	Identity:	113/195 - (57%)
Similarity:	156/195 - (80%)	Gaps:	0/195 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 VKLFALSIFHKGASEARLLKTASDLQSFSFFQRGTVNEFMTFASKTIVERTQPALRQSVKQDAYM 66
            :||::||:.:||.::..|||:|.|:.|||||||.::.|||.|.|:.||||:....|.|||:..|:
Frog     1 MKLYSLSVLYKGDNKVSLLKSAYDVSSFSFFQRSSIQEFMAFTSQLIVERSDKGSRSSVKEQEYL 65

  Fly    67 CHVYVRADNLAGVLIADHEYPHRVAHTLITKILDDFTAKVSADQWPNGTEATISFDLLPAFLARY 131
            ||||||.|:||||:|||:|||.||..||:.|:|::|:.:|....||:|:.|||.::.|.::|::|
Frog    66 CHVYVRNDSLAGVVIADNEYPPRVCFTLLEKVLEEFSTQVDRIDWPSGSPATIQYNALDSYLSKY 130

  Fly   132 QNPVEADPLTKMQNDLDETKIILKNTIEAVLERGEKLDDMVSKSEKLSLQSKAFYKTAKKTNSCC 196
            |||.:|||::|:|.:||||||||.||:|::|:|||||||:|||||.|..|||||||||:|.||||
Frog   131 QNPRDADPMSKVQAELDETKIILHNTMESLLQRGEKLDDLVSKSEVLGTQSKAFYKTARKQNSCC 195

Fly 197 196
Frog 196 195

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ykt6	NP_572423.1	SNC1	4..196	CDD:227472	110/191 (58%)
ykt6	NP_989023.1	SNC1	3..198	CDD:227472	112/193 (58%)
ykt6	NP_989023.1	R-SNARE_YKT6	136..195	CDD:277220	42/58 (72%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	86	1.000	Domainoid score	I8017
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H4778
Inparanoid	1	1.050	241	1.000	Inparanoid score	I3246
OMA	1	1.010	-	-		QHG53588
OrthoDB	1	1.010	-	-		D1362424at2759
OrthoFinder	1	1.000	-	-		FOG0004435
OrthoInspector	1	1.000	-	-		oto103923
Panther	1	1.100	-	-	LDO	PTHR45806
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1932
SonicParanoid	1	1.000	-	-		X3142
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	12	12.110