Protein Alignment hdm and RPA70B

DIOPT Version :10

• Sequence 1: NP_572422.1
• Gene: hdm / 31705
• FlyBaseID: FBgn0029977
• Length: 486
• Species: Drosophila melanogaster
• Sequence 2: NP_196419.1
• Gene: RPA70B / 830696
• AraportID: AT5G08020
• Length: 604
• Species: Arabidopsis thaliana
• Alignment Length: 357
• Identity: 71/357 - (19%)
• Similarity: 128/357 - (35%)
• Gaps: 84/357 - (23%)

  Fly   143 PIRPLGAVLKLADVRSGLGFPDKIITTNVNLLVVVAAVRPVRQIKRKLQGPLSEVQELLQCLEVI 207
            ||..||..:...|:              ::::.||.:|.|...|:||      ...|::...::.
plant   279 PIDELGTYVNQKDL--------------IDVIGVVQSVSPTMSIRRK------NDNEMIPKRDIT 323

  Fly   208 VIDASYPEGMLLSVWQPDWI----QRAQQWQPRRTVLHLIDVRVSYSNFHRSLVLSHSNCTLICE 268
            :.|.: .:.:::|:|. |..    |..........|:.:..::|..........:|.||..:...
plant   324 LADET-KKTVVVSLWN-DLATGIGQELLDMADNHPVIAIKSLKVGAFQGVSLSTISRSNVVINPN 386

  Fly   269 NPQAAGDDCRLLLAFAATVPLTTFSGCDQAELDNMPAVA---SIQAQMTVRQIYSR---AEGELQ 327
            :|:|              ..|.::...:..| .:|.|:.   |..|....|.:||.   ......
plant   387 SPEA--------------TKLKSWYDAEGKE-TSMSAIGSGMSSSANNGSRSMYSDRVFLSHITS 436

  Fly   328 DPSIHQFTAVLYGMVTKFDLDGLTSHVN-------RKCIACQQHIPRNLQD---CASDACQQYFS 382
            :||:.:...|.      |......|.:.       |.|..|.:.:...:..   |  ::||:
plant   437 NPSLGEEKPVF------FSTRAYISFIKPDQTMWYRACKTCNKKVTEAMDSGYWC--ESCQK--- 490

  Fly   383 LDNDEPRSISYFNINIHLSDQTG-TLVEARLAGHPAERILGLRAEDFERLAEREKSELKWRFLLK 446
              .|:..|:.|. :.:.:||.|| |.:.|  ....||:|:|..|:|...|...|..       :.
plant   491 --KDQECSLRYI-MAVKVSDSTGETWLSA--FNDEAEKIIGCTADDLNDLKSEEGE-------VN 543

  Fly   447 YFEVRLMIKKPVGVRNHLVIVVVDMQAIPLEK 478
            .|:.:|   |.....:||..:.|..|....||
plant   544 EFQTKL---KEATWSSHLFRISVSQQEYNSEK 572

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
hdm	NP_572422.1	None
RPA70B	NP_196419.1	rpa1	4..599	CDD:273177	71/357 (20%)