Protein Alignment hdm and AT3G32260

DIOPT Version :10

• Sequence 1: NP_572422.1
• Gene: hdm / 31705
• FlyBaseID: FBgn0029977
• Length: 486
• Species: Drosophila melanogaster
• Sequence 2: NP_189768.1
• Gene: AT3G32260 / 822997
• AraportID: AT3G32260
• Length: 309
• Species: Arabidopsis thaliana
• Alignment Length: 274
• Identity: 56/274 - (20%)
• Similarity: 104/274 - (37%)
• Gaps: 74/274 - (27%)

  Fly   101 QRYQPQATVSCALVVNEGSGYVVRHDNDD-FGQITILQQLLHQPIRPLGA-VLKLADVRSGLGFP 163
            :|:|.|.....:.:::..| :|   |.|| .|||..:.::  ..::..|. .:||:.....||.|
plant    60 KRFQHQLVNGESRIIDTFS-FV---DYDDVLGQIVDVWEV--NSVKAKGKDTVKLSFELQDLGLP 118

  Fly   164 ---------DKIITTNVNLLVVVAAVRPVRQIKRKL---------QGPLSEVQELLQC----LEV 206
                     |..:.||...:..|.|:.....|..|:         ||...:...:..|    .:|
plant   119 PGREDLIHVDCEVKTNRLRICFVEAMPKWYYIAYKVCGKKVQPYPQGSHGDASPIYSCGVCDCDV 183

  Fly   207 --------IVIDASY---PEGMLLSVWQPDWIQRAQQWQPRRTVLHLIDVRVS------------ 248
                    :::.|||   ||..||..   |.:  ||:...:.|.:...:|..|
plant   184 TNVNYRYKLILRASYGASPEVKLLIF---DGL--AQRLIGKTTAMLFAEVPESDPSILSDVLADL 243

  Fly   249 YSNFHRSLVLSHSNCTLICENPQAAGDDCRLLLAFAATVPLTTFSGCDQAELDNMPAVASIQAQM 313
            ....|..:|:|:|.|.:|..|       ..::.:....|.|:|    |:...|::.....
plant   244 MGKIHEMIVVSNSVCDIIKSN-------IEMIESSTVDVSLST----DKRVFDDLKPKPD----- 292

  Fly   314 TVRQIYSRAEGELQ 327
            |.:::::|.:.:|:
plant   293 TGKKVFTRKKPKLE 306

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
hdm	NP_572422.1	None
AT3G32260	NP_189768.1	RPA1_DBD_A_like	23..>80	CDD:239926	4/20 (20%)
		RPA1_DBD_C	110..>252	CDD:239922	28/146 (19%)