Sequence 1: | NP_572422.1 | Gene: | hdm / 31705 | FlyBaseID: | FBgn0029977 | Length: | 486 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_495606.1 | Gene: | rpa-1 / 174238 | WormBaseID: | WBGene00017546 | Length: | 655 | Species: | Caenorhabditis elegans |
Alignment Length: | 505 | Identity: | 109/505 - (21%) |
---|---|---|---|
Similarity: | 190/505 - (37%) | Gaps: | 140/505 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 40 SGTERGVLSLTIRDSPNHLTNCKCWGQRDCVDEY----AAMLQIGH--VVDIVGAKVMSIPFAAP 98
Fly 99 GEQRYQPQATVSCALVVNEGSGYVVRHDNDDFG------QITILQ--------QLLHQPIRPLGA 149
Fly 150 VLKLADVRSGLGFPDKIITTNVNLLVVVAAVRPVRQ----------IKRKLQGPLSEVQELLQCL 204
Fly 205 EVIVIDASYPEGML--LSVW--------QPDWIQRAQQWQ---PRRTVLHLIDVRVSYSNFHRSL 256
Fly 257 VLSHSNCTLICENPQAAGDDCRLLLAFAATVPLTTFSGCDQAELDNMPAVASIQAQMTVRQIYSR 321
Fly 322 AEGELQDPSIHQFTAVLYGMVTKFDLDGLTSHVNRKCIACQQHIPRN--LQDCASDACQQYFSLD 384
Fly 385 NDEPR------SISYFN----INIHLSDQTGTLVEARLAGHPAERILGLRAEDFERLAEREKSEL 439
Fly 440 -----KWRFLLKYFEVRL-MIKKPVGVRNHLVIVVVDMQAIPLEKLVANM 483 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
hdm | NP_572422.1 | None | |||
rpa-1 | NP_495606.1 | rpa1 | 12..648 | CDD:273177 | 109/505 (22%) |
RPA1_DBD_A | 225..325 | CDD:239920 | 19/105 (18%) | ||
RPA1_DBD_B | 353..455 | CDD:239921 | 28/140 (20%) | ||
Rep_fac-A_C | 498..642 | CDD:285809 | 37/168 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1599 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |