DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hdm and meiob

DIOPT Version :9

Sequence 1:NP_572422.1 Gene:hdm / 31705 FlyBaseID:FBgn0029977 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_031749523.1 Gene:meiob / 100489575 XenbaseID:XB-GENE-987591 Length:471 Species:Xenopus tropicalis


Alignment Length:491 Identity:137/491 - (27%)
Similarity:227/491 - (46%) Gaps:59/491 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FQRLAEMRPTMTRFSTVALIVSKSSPNIFYDKMS-GTERGVLSLTIRDSPNHLTNCKCWGQRDCV 70
            |..::::.|.:.|.|.:.:::.|:....|.|:.: |:||...|.|:||||....|...||..:.:
 Frog     9 FVNISDLHPNLNRPSVIGVVIGKTDVKGFPDRKNIGSERYTFSFTMRDSPAFFINAFSWGTEEYI 73

  Fly    71 DEYAAMLQIGHVVDIVGAKVMSIPFAAPGEQRYQPQATVSCALVVNEGSGYV-----VRHDNDDF 130
            ...:...::|..|.|....|.:..  ...|:::.|.......|:::|....|     ...||.  
 Frog    74 KSLSDSFRVGDCVLIENPLVQTKD--VEREEKFNPSTPSYYRLLISEVHSAVKICSTCEVDNS-- 134

  Fly   131 GQITILQQLLHQPIRPLGAVLKLAD-VRSGLGFPDKIITTNVNLLVVVAAVRPVRQIKR-----K 189
                 |..:||.|.:.......|.| |.:|.....|:|.       |:|||:.|.:||.     |
 Frog   135 -----LLSVLHLPTKDPQDYYSLGDIVANGQSLNGKMIN-------VLAAVKSVGEIKHFTTSDK 187

  Fly   190 LQGPLSEVQELLQCLEVIVIDASYPE-GMLLSVWQPDWIQRAQQWQPRRTVLHLIDVRVSYSNFH 253
            .:|         |..||.:.|...|. ||:  .|..:.||..|.|.||.||:...|||::|.:|.
 Frog   188 RKG---------QRCEVKLYDDVVPSFGMI--CWDNESIQVTQSWIPRETVIFAADVRINYDSFR 241

  Fly   254 RSLVLSHSNCTLICENPQAAGDDCRLLLAFAATVPLTTFSGCDQAELDNMPAV--ASIQAQMTVR 316
            .|:|.:..:.|::..:|..  .:.:.||::|... :.|...|::.|..:..:|  .||:...||:
 Frog   242 NSMVATVVSKTILTTSPDT--PEAQALLSYARDC-IETGVFCEENEELSKDSVKLESIKDIYTVQ 303

  Fly   317 QIYSRA-EG-ELQDPSIHQFTAVLYGMVTKFDLDGLTSHVNR-KCIACQQHIPRNLQDCASDACQ 378
            ||..:| :| |..||    ...::|..:::|::|...|.:.| :|..|...|....:.|....|.
 Frog   304 QIKEKATQGVEKNDP----LYGIVYAYISRFNVDSDASKIIRNRCSRCHYLITDLTELCTYTFCN 364

  Fly   379 QYFSLDNDEPRS-ISYFNINIHLSDQTGTLVEARLAGHPAERILGLRAEDFERLAEREKSELKWR 442
            :..|    ||:| ::..:::|.|:|.|||| .|.::|..||.:|....:.|..|.|.:|:.|||.
 Frog   365 EMSS----EPKSVVACLDLSIDLTDHTGTL-SANVSGSAAEEMLSCTVDGFFNLTEDQKTALKWN 424

  Fly   443 FLLKYFEVRLMIKKPVGVRNHLVIVVVDM-QAIPLE 477
            |||:..::.|.:......|:.|.|.|:.. .|.|||
 Frog   425 FLLERCKIYLKMVPSTNARSGLRINVLSCNMADPLE 460



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 137 1.000 Domainoid score I4847
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H102013
Inparanoid 1 1.050 138 1.000 Inparanoid score I4423
OMA 1 1.010 - - QHG47556
OrthoDB 1 1.010 - - D277291at33208
OrthoFinder 1 1.000 - - FOG0006958
OrthoInspector 1 1.000 - - oto104672
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.980

Return to query results.
Submit another query.