DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snz and SNX25

DIOPT Version :9

Sequence 1:NP_001284993.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_001364961.1 Gene:SNX25 / 83891 HGNCID:21883 Length:1037 Species:Homo sapiens


Alignment Length:1018 Identity:317/1018 - (31%)
Similarity:522/1018 - (51%) Gaps:164/1018 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 VVYSLVLVFAAVAGTVYIHYIFTTNEPTPPSRVP------SRLLYNATKSNIFDLPKPIKNPSNL 134
            |::.|.|..:..|....:..:|.....:|.::.|      |||.  ||.:        .:.|...
Human    90 VLFRLSLYLSCAAAAFLLGILFALVCRSPRAQPPDFAAAWSRLA--ATSA--------ARRPPGS 144

  Fly   135 P-------------LIFGKTVDLQLQQIIEYVLRDFMLPWLGYVVTKPKLINDVVREDLWNAIQK 186
            |             ::....:|..|:::.:|..||::|.|.|.:......:..::.||.|...::
Human   145 PVYGNSHESAQSRRVVISHNMDKALKEVFDYSYRDYILSWYGNLSRDEGQLYHLLLEDFWEIARQ 209

  Fly   187 IHERALRMDAAKIIAVDMVNRVTVHLEKIRIAEARAAETNTPPVFSTNSYLADEEKEMEFLRKLC 251
            :|.|...:|..|::..|:|..:..|...::.|.||..|...|  |..::.|.:.:.|:.||:...
Human   210 LHHRLSHVDVVKVVCNDVVRTLLTHFCDLKAANARHEEQPRP--FVLHACLRNSDDEVRFLQTCS 272

  Fly   252 EIMVILLLP-RGYSLPPLKVLLSEILSYKIFFPMIKMLTAPDYINQKVVQNIETRLAAAAMSKRS 315
            .::|..||| :......|:::|:|||:.|:..|::::|:.||||||.::..:..|.......||:
Human   273 RVLVFCLLPSKDVQSLSLRIMLAEILTTKVLKPVVELLSNPDYINQMLLAQLAYREQMNEHHKRA 337

  Fly   316 YEYAASFEDFLKIINNSGNLEELSLIRKS---------------------------------IVN 347
            |.||.|:|||:|:||::.::|.|..:|:|                                 ||.
Human   338 YTYAPSYEDFIKLINSNSDVEFLKQLRESVQTSALLILEPNSALAKSYPPLEKENRVSARYQIVV 402

  Fly   348 DLMHATTMQN---LQRAKGLDPDHEDHSLSKSELTAAVRLKRYVRQLTMAKGECEKNLAKFG--- 406
            :::.|||:.:   |:|.||     ::.:..|::|..|..:|||:.|||:||.:|||.:...|   
Human   403 EIIQATTISSFPQLKRHKG-----KETAAMKADLLRARNMKRYINQLTVAKKQCEKRIRILGGPA 462

  Fly   407 -----------WNGNYSSDIDLTLVEILNTAVGRRYFTLFLEPLKASALIGFYLAVEEIKHAHKS 460
                       ..|..|..| |...:||.....|.:|.:::|.:...|||.|:.:||.:|:|:|:
Human   463 YDQQEDGALDEGEGPQSQKI-LQFEDILANTFYREHFGMYMERMDKRALISFWESVEHLKNANKN 526

  Fly   461 ASHQLGTEIFYTYIRVPKSEIQIDKHERKLIETFLLGDAEPDIFYDIQRNVLRTLEEKYYPPFVL 525
            ...||..||:..:. |...||.::|...|.|:..|:|:...::||.||.:|..||:::|||.|::
Human   527 EIPQLVGEIYQNFF-VESKEISVEKSLYKEIQQCLVGNKGIEVFYKIQEDVYETLKDRYYPSFIV 590

  Fly   526 SDQYRQL----KEALDSNEIADPTLLMCHTIGDVQEPLADE--QPGAADGLNGGAGGAIDVAAHT 584
            ||.|.:|    :|...|..|::.         |...| .||  :....||.|       .:....
Human   591 SDLYEKLLIKEEEKHASQMISNK---------DEMGP-RDEAGEEAVDDGTN-------QINEQA 638

  Fly   585 SYARRKLEQIQERIDKKNQALDALKYSVKPESKVLTILEKEMEWLKSEKRQTEAHLRRTDAWTEH 649
            |:|..||.::.|:::.|.|||::::.:.||:.|:::.|:.|:..::.|:...:.|:.|||.|.|:
Human   639 SFAVNKLRELNEKLEYKRQALNSIQNAPKPDKKIVSKLKDEIILIEKERTDLQLHMARTDWWCEN 703

  Fly   650 LGKWKATIQSVEVSDEK-ESLQ-FMILVHVDEDINAPVQPTSSKNGDSGHANLRKRPSGISSGWV 712
            ||.|||:|.|.||::|. |.|. :.::|.:.|     |....:||                  |.
Human   704 LGMWKASITSGEVTEENGEQLPCYFVMVSLQE-----VGGVETKN------------------WT 745

  Fly   713 VMRSLNQVHELQRKLRHVSSNLKAIDLPTNFKFFFLKTDRHGQEKAKSQIQKFLNFILEDDHLNG 777
            |.|.|::...|.|||.....:||.:.||:..|..|...|:...||:|:|:.|||..:|.|:.|..
Human   746 VPRRLSEFQNLHRKLSECVPSLKKVQLPSLSKLPFKSIDQKFMEKSKNQLNKFLQNLLSDERLCQ 810

  Fly   778 SEAIYTFLSPSSDHLKQSLPSPKKSKFSLSTLFRSDAGKAHEASKATDPFWGLQ----RDDEDIS 838
            |||:|.|||||.|:||......||:.||||:..          .:....|:..|    .:|.|:|
Human   811 SEALYAFLSPSPDYLKVIDVQGKKNSFSLSSFL----------ERLPRDFFSHQEEETEEDSDLS 865

  Fly   839 TYLDGESGGEAKMLAADLDS-KDSIAEPMYALMGEIFDMGGVFKWLRKSLISFVQITYGRTINRQ 902
            .|.|            |:|. ||::|||.:.|:||||::.|:|||:|::||:.||:|:|||||:|
Human   866 DYGD------------DVDGRKDALAEPCFMLIGEIFELRGMFKWVRRTLIALVQVTFGRTINKQ 918

  Fly   903 IRESVAYLFEESMLHNYFSAILKSFWPGGVLASAYPTRSEDMREMTTTAAKALLTDHIPEVLCNL 967
            ||::|:::|.|.||..|.:....:|||.|.||.....||::..:.|...|:..|.::||::|.:|
Human   919 IRDTVSWIFSEQMLVYYINIFRDAFWPNGKLAPPTTIRSKEQSQETKQRAQQKLLENIPDMLQSL 983

  Fly   968 VGAQAAKRGVLKVFDALQNPAYNKQLFYELLEILMIEFFPEIR 1010
            ||.|.|:.|::|:|:|||....||.|.|.|:|:|:||..||:|
Human   984 VGQQNARHGIIKIFNALQETRANKHLLYALMELLLIELCPELR 1026

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_001284993.1 PXA 142..299 CDD:280373 46/157 (29%)
RGS_SNX25 422..531 CDD:188675 40/108 (37%)
PX_SNX25 645..788 CDD:132788 51/144 (35%)
Nexin_C 882..987 CDD:285792 46/104 (44%)
SNX25NP_001364961.1 PXA 166..321 CDD:396666 46/156 (29%)
235kDa-fam <331..>691 CDD:130673 110/383 (29%)
RGS_SNX25 488..596 CDD:188675 40/108 (37%)
PX_SNX25 699..821 CDD:132788 51/144 (35%)
Nexin_C 898..1004 CDD:400794 46/105 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159212
Domainoid 1 1.000 101 1.000 Domainoid score I6967
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H23744
Inparanoid 1 1.050 480 1.000 Inparanoid score I1475
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG50023
OrthoDB 1 1.010 - - D104136at33208
OrthoFinder 1 1.000 - - FOG0006633
OrthoInspector 1 1.000 - - oto90501
orthoMCL 1 0.900 - - OOG6_106742
Panther 1 1.100 - - O PTHR22775
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1370
SonicParanoid 1 1.000 - - X6390
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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