DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snz and AT2G15900

DIOPT Version :9

Sequence 1:NP_001284993.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_179190.3 Gene:AT2G15900 / 816086 AraportID:AT2G15900 Length:994 Species:Arabidopsis thaliana


Alignment Length:1107 Identity:201/1107 - (18%)
Similarity:381/1107 - (34%) Gaps:298/1107 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 AVIW----YYPTFFLFFAFVVYSLVLVFAAV----AGTVYIHYIFTTNEPTPPSRVPSRLLYNAT 117
            ||.|    :..|:||....:.:.|.|..|.:    |...:.|:.|....|..|.:  |:|.|...
plant    18 AVWWCLCIFSVTYFLTHTSIYWWLNLPIAILICGGARFFFNHFEFRWKVPATPRQ--SQLSYLEK 80

  Fly   118 KS------NIFDLPKPIKNPSNLPLIFGKTVDLQLQQIIEYVLRDFMLPWLGYVVTKPKLINDVV 176
            |.      .:..:|.|   |.....|....|:..:...|:.:|.||::.....::|..|...:::
plant    81 KQLSVNDPRLSGIPPP---PRWKKKIDSPVVEAAINDFIDKILNDFVVNLWYSLITPDKEAPELI 142

  Fly   177 REDLWNAIQKIHERALRMDAAKIIAVDMVNRVTVHLEKIRIAEARAAETNTPPVFSTNS------ 235
            |..:.:|:.:|..|...::...::..|:|:.:..|||..|..:| |..|:.....|:..      
plant   143 RAVIMDALGEISVRVKEINIVDLLTRDIVDLIGDHLESFRRNQA-AIGTDVMKTLSSEERDERLK 206

  Fly   236 -----------YLADEEKEMEFLRKL-CEIMVILLLPRGYSLPPLKVLLSEILSYKIFFPMIKML 288
                       .|...|.|.:.|:|: ..|:.::|.||....|.::.:..||::..:..|::. |
plant   207 YHLMASGELYPALVSPESEYKVLQKIVAGILSVVLRPREAQCPLVRTIAREIVTCLVIQPLLN-L 270

  Fly   289 TAPDYINQKVVQNIETRLAAAAMSKRSYEYAASFEDFLKIINNSGNLEELSLIRKSIVNDLMHAT 353
            ..|:.||:                        .||..:.:| ..||.|:.:...:::.:..:.|.
plant   271 ACPERINE------------------------VFEIIINLI-KEGNFEQFTAEEQNVNSAPLSAF 310

  Fly   354 TMQ----NL-----QRAKGLDPDHED-----HSLS-----------KSELTAAVRLKR-YVRQLT 392
            ..|    ||     |::..::..|.|     ||..           ::|:.....|:. :.:...
plant   311 DSQAKNMNLTKAIEQKSPNINDRHPDLHVQQHSADWARSLEVATQRRTEVLRPENLENMWTKGRN 375

  Fly   393 MAKGECEKNLAKFGWNGNYSSDIDLTLVEILNTAVGRRYFTLFLEPLKASALIGFYLAVEEIKHA 457
            ..|.|.:|:|.|                   .::.|.:...:...|.|.|.  ......:..:..
plant   376 YQKKEYKKSLKK-------------------GSSTGAKENAVAQLPPKVST--DKQSQAQMAEEF 419

  Fly   458 HKSASHQLGTEIFYTYI-----------RVPKSEIQIDKHERKLIETFLLGDAEPDIFYDIQRNV 511
            .||:.|..|.:|:...:           |:.:|....|.:.|......|||.:|..:        
plant   420 SKSSLHDGGHQIYEADVRKESRSDGNKNRLKRSNSTSDLNLRPETSLALLGVSEGPL-------- 476

  Fly   512 LRTLEEKYYPPFVL-SDQYRQLKEALDSNEIADPTL---------LMCHTIGDVQEPLADEQPGA 566
               :.|.|...|:. :|.|      :..|:.....|         |.|..:|...|.        
plant   477 ---ITEFYTTDFIKHNDNY------ISDNKSQSIVLHKEGQHCLKLKCRVLGAYFEK-------- 524

  Fly   567 ADGLNGGAGGAI------DVAAHTSYARRKLEQIQERIDKKNQALDALKYSVK-PESKVLTILEK 624
                .|....|:      ||...|.:.:|:.... ||:.:  |..:...|::: |..::.:    
plant   525 ----QGSKSFAVYSIAVTDVENKTWFVKRRYSNF-ERLHR--QLKEIPNYNLQLPPKRIFS---- 578

  Fly   625 EMEWLKSEKRQTEAHLR--RTDAWTEHLGKWKATIQSVEVSDEKESLQFMILVHVDEDI--NAPV 685
                  |.......|.|  :.|.:.:.|      :....|:::.|...|:.....:...  ::.|
plant   579 ------SSTEDAFVHRRCIQLDKYLQDL------LCIANVAEQHEVWDFLSAASKNYSFGKSSSV 631

  Fly   686 QPTSSKNGDSGHANLRKRPSGISSGWV--VMRSLNQVHELQRKLRHVSSNLKAIDLPTNFKFFFL 748
            ..|.:.|.|....::.::..|:|.|.:  |:.|....|: ....||:|.::..|           
plant   632 MKTLAVNVDDAMDDIVRQFKGVSDGLMRKVVGSPLDEHD-HAPTRHLSWSVNEI----------- 684

  Fly   749 KTDRHGQEKAKSQIQKFLNFILEDDHL--------------NG----SEAIYTFLSPSSDHL--- 792
             :.:..:|.|...:...::...:.|.|              ||    :|....::.|.....   
plant   685 -STQLSRESATESMHSSISDTEDIDKLGENTQGEGRFDSEANGWHSDNELDSKYVPPRVVRRLGE 748

  Fly   793 KQSLPSPKKSKFSLSTLFRSDAGKAHEASKATDPFWGLQRDDEDISTYLDGESGGEAKMLAADLD 857
            .:|.||.|::.|...:..|......|     .||...|.::...|..::                
plant   749 PESSPSEKENDFKAKSQVRGSTDFQH-----ADPLTALVQNPHGIPEWM---------------- 792

  Fly   858 SKDSIAEPMYALMGEIFDMG--GVFKWLRKSLI----SFVQITYGRTINRQIRESVAYLFEESML 916
             ..:::.|:..|:.::|.:.  |   |||:.:.    ..:|:.....::..:...:.:|..|..:
plant   793 -PPNVSVPILNLVDKVFQLNRRG---WLRRQVFWISKQILQLVMEDAVDDLLMREICWLRNEDTI 853

  Fly   917 HNYFSAILKSFWPGGVLASAYPTRSEDMREMT--------------------------------- 948
            ...........||.||    :.||..|.:|.:                                 
plant   854 AQGIRWAQDILWPNGV----FFTRLNDSQEASDETDPSEKTYQMAGQLGGMKVTKPSSFEQQLEA 914

  Fly   949 ---TTAAKALLTDHIPEVLCNLVGAQAAKRGVLKVFDALQNPAYNKQLFYELLEILMIEFFPEIR 1010
               .:..|..|.|..|..|.:|||....:|....:|...|:....|||.:.:||:|:...|||::
plant   915 FRRASEIKKFLFDGAPTALVSLVGHNQYRRCARDIFYFTQSNICIKQLTFAILELLLRSVFPELQ 979

  Fly  1011 QL 1012
            .|
plant   980 DL 981

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_001284993.1 PXA 142..299 CDD:280373 38/174 (22%)
RGS_SNX25 422..531 CDD:188675 22/120 (18%)
PX_SNX25 645..788 CDD:132788 25/164 (15%)
Nexin_C 882..987 CDD:285792 25/144 (17%)
AT2G15900NP_179190.3 PXA 105..286 CDD:366970 40/206 (19%)
PX_SNX19_like_plant 513..619 CDD:132782 23/136 (17%)
Nexin_C 815..957 CDD:370015 25/145 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 87 1.000 Inparanoid score I2319
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.910

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